Pairwise Alignments

Query, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 517 a.a., D-ribose transporter ATP-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  635 bits (1638), Expect = 0.0
 Identities = 322/491 (65%), Positives = 392/491 (79%), Gaps = 1/491 (0%)

Query: 22  FLLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIR 81
           +LL    + K FPGVVAL DVQ  ++ G+V ALMGENGAGKSTLMKI+AGIYQPD GE+R
Sbjct: 25  YLLEVVNVSKGFPGVVALSDVQLRVRPGSVLALMGENGAGKSTLMKIIAGIYQPDAGELR 84

Query: 82  LKGAPIRLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFIDHGEMYRRT 141
           L+G P+  D+PL AL+ GIAMIHQELNLM +M++AENIWI RE  N L  +DHGEM+R T
Sbjct: 85  LRGKPVTFDTPLAALQAGIAMIHQELNLMPHMSIAENIWIGREQLNGLHMVDHGEMHRCT 144

Query: 142 ETLLERLGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFR 201
             LLERL I LDPE +VG LS+A RQMVEIAKAVSY+SD+LIMDEPTSA+TE EV HLF 
Sbjct: 145 ARLLERLRIKLDPEEQVGNLSIAERQMVEIAKAVSYDSDILIMDEPTSAITETEVAHLFS 204

Query: 202 IIRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGREI 261
           II DL+ +G GI+YITHKMNE+F IADE +VFRDG YIG   +  +  D +I MMVGRE+
Sbjct: 205 IIADLKSQGKGIIYITHKMNEVFAIADEVAVFRDGAYIGLQRADSMDGDSLISMMVGREL 264

Query: 262 TQMFPKEEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRSNVAETVFGV 321
           +Q+FP  E PIG++VLSV++L+LDG+F  VSFD+ AGEILG+AGL+GSGR+NVAE +FGV
Sbjct: 265 SQLFPVREQPIGELVLSVRDLSLDGIFKGVSFDLHAGEILGIAGLMGSGRTNVAEAIFGV 324

Query: 322 TPASSGTISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQIAVLQDKYV 381
           TP++ G I +DG+PV I  P  AI    A LTEDRK +G    L++LENM++AVL   YV
Sbjct: 325 TPSTGGEIRLDGQPVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVL-PHYV 383

Query: 382 ANGFVQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLTKPRILILDE 441
            NGF+Q+ AL   CE+MC+KLRVKTP L + I+ LSGGNQQK L+ RW++T PRILILDE
Sbjct: 384 GNGFIQQKALRALCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRILILDE 443

Query: 442 PTRGIDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGRVTGFLARSE 501
           PTRGIDVGAKAEI++L+  +A +G+AVIMISSE+PEVLGMSDRVMVMHEG + G L RSE
Sbjct: 444 PTRGIDVGAKAEIYRLISYLASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGTLDRSE 503

Query: 502 ATQVKVMDLAS 512
           ATQ +VM LAS
Sbjct: 504 ATQERVMQLAS 514



 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 14/240 (5%)

Query: 24  LAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLK 83
           L+ DGI K          V F L  G +  + G  G+G++ + + + G+     GEIRL 
Sbjct: 285 LSLDGIFK---------GVSFDLHAGEILGIAGLMGSGRTNVAEAIFGVTPSTGGEIRLD 335

Query: 84  GAPIRLDSPLDALENGIAMIHQELNLMAY---MTVAENIWIRREPKN-RLGFIDHGEMYR 139
           G P+R+  P  A+E G A++ ++  L      ++V EN+ +   P     GFI    +  
Sbjct: 336 GQPVRISDPHMAIEKGFALLTEDRKLSGLFPCLSVLENMEMAVLPHYVGNGFIQQKALRA 395

Query: 140 RTETLLERLGIDLDP-ETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEH 198
             E + ++L +     E  +  LS  ++Q   +A+ +  N  +LI+DEPT  +       
Sbjct: 396 LCEDMCKKLRVKTPSLEQCIDTLSGGNQQKALLARWLMTNPRILILDEPTRGIDVGAKAE 455

Query: 199 LFRIIRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVG 258
           ++R+I  L   G+ ++ I+ ++ E+  ++D   V  +G  +GT   ++ T++ ++++  G
Sbjct: 456 IYRLISYLASEGMAVIMISSELPEVLGMSDRVMVMHEGDLMGTLDRSEATQERVMQLASG 515