Pairwise Alignments

Query, 513 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Escherichia coli Nissle 1917

 Score =  439 bits (1130), Expect = e-128
 Identities = 230/491 (46%), Positives = 326/491 (66%), Gaps = 1/491 (0%)

Query: 21  EFLLAADGIRKEFPGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEI 80
           E LL   GI K FPGV AL     ++  G V AL+GENGAGKST+MK+L GIY  D G +
Sbjct: 2   EALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTL 61

Query: 81  RLKGAPIRLDSPLDALENGIAMIHQELNLMAYMTVAENIWIRREPKNRLGFIDHGEMYRR 140
              G       P  + E GI +IHQELNL+  +T+AENI++ RE  NR G ID   MY  
Sbjct: 62  LWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAE 121

Query: 141 TETLLERLGIDLDPETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLF 200
            + LL +L +    +  VG+LS+  +QMVEIAK +S+ S V+IMDEPT ALT+ E E LF
Sbjct: 122 ADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLF 181

Query: 201 RIIRDLRERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGRE 260
           R+IR+L+ +G GIVYI+H+M E+FEI D+ +VFRDG++I       +T D +I MMVGR+
Sbjct: 182 RVIRELKLQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRK 241

Query: 261 ITQMFPKEEVPIGDVVLSVKNLNLDGVFHDVSFDVRAGEILGVAGLVGSGRSNVAETVFG 320
           +   +P  +   GD+ L V NL   GV +DVSF +R GEILGV+GL+G+GR+ + + ++G
Sbjct: 242 LEDQYPHLDKAPGDIRLKVDNLCGPGV-NDVSFTLRKGEILGVSGLMGAGRTELMKVLYG 300

Query: 321 VTPASSGTISIDGKPVSIDSPTTAISHRMAFLTEDRKDTGCLLILNILENMQIAVLQDKY 380
             P +SG +++DG  V   SP   +++ + +++EDRK  G +L +++ ENM +  L+   
Sbjct: 301 ALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFS 360

Query: 381 VANGFVQENALSEACEEMCRKLRVKTPHLYERIENLSGGNQQKVLIGRWMLTKPRILILD 440
            A G ++     +A  +  R   VKTP + + I  LSGGNQQKV I R ++T+P++LILD
Sbjct: 361 RAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILD 420

Query: 441 EPTRGIDVGAKAEIHKLVCEMARQGVAVIMISSEMPEVLGMSDRVMVMHEGRVTGFLARS 500
           EPTRG+DVGAK EI++L+ +    G+++I++SSEMPEVLGMSDR++VMHEG ++G   R 
Sbjct: 421 EPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTRE 480

Query: 501 EATQVKVMDLA 511
           +ATQ  +M  A
Sbjct: 481 QATQEVLMAAA 491



 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 9/232 (3%)

Query: 34  PGVVALDDVQFHLKRGTVHALMGENGAGKSTLMKILAGIYQPDNGEIRLKGAPIRLDSPL 93
           PGV   +DV F L++G +  + G  GAG++ LMK+L G     +G + L G  +   SP 
Sbjct: 266 PGV---NDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQ 322

Query: 94  DALENGIAMIHQELN---LMAYMTVAENIWIR--REPKNRLGFIDHGEMYRRTETLLERL 148
           D L NGI  I ++     L+  M+V EN+ +   R      G + H +  +     +   
Sbjct: 323 DGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF 382

Query: 149 GIDLDP-ETRVGELSVASRQMVEIAKAVSYNSDVLIMDEPTSALTEREVEHLFRIIRDLR 207
            +     E  +G LS  ++Q V IA+ +     VLI+DEPT  +     + ++++I   +
Sbjct: 383 NVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFK 442

Query: 208 ERGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHASTDVTRDDIIRMMVGR 259
             G+ I+ ++ +M E+  ++D   V  +G   G       T++ ++   VG+
Sbjct: 443 ADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGK 494