Pairwise Alignments

Query, 342 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 320 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  193 bits (491), Expect = 4e-54
 Identities = 123/329 (37%), Positives = 188/329 (57%), Gaps = 27/329 (8%)

Query: 20  RRIPPEANIFFVLIGIALVYEILGWIFIGQSFLLNQQRLTIMILQVSVIGIIAVGVTQVI 79
           R +     IF  L+ + +V+      F+     +N      ++ QV+V+ I A G+T VI
Sbjct: 13  RALKQYGGIFLSLVMLCIVFSFFNPRFMTVVNFMN------ILQQVAVVAIAAFGMTWVI 66

Query: 80  ITGGIDLSSGSVVGLTAMLAASVGQSSTWPRALYPGLTDLPFFIPLAVGILAGALAGFIN 139
           + G IDLS GS++ +  M+ A   Q   +     P +         A+ + AGAL G +N
Sbjct: 67  LLGEIDLSVGSIIAVAGMVGA---QCFAFGMGFAPAI---------ALTLAAGALMGMLN 114

Query: 140 GQLIARTKIPPFIATLGMMVTARGLSKWYTKGQPISGLTDGFTFIGTGVW---PVVVFLV 196
           G L A+  +P FI T+  M   RG+    T G P     + +T IGT  +   P++++ V
Sbjct: 115 GVLTAKLLLPSFIVTVATMGIYRGMVSLPTNGAPAMIENETWTAIGTESFLGLPIIIW-V 173

Query: 197 VAIIF---HVALRYTRYGKFTYAIGANQQAARVSGINIEAHLIKVYAIAGLLAGLAGVVT 253
           VA++F    + L  T +G+  Y  G N++AA  SGI ++   I ++ I+G++A ++GV+ 
Sbjct: 174 VAVLFVINQIVLSKTSFGRRAYLTGGNREAAVYSGIKVDRLKILIFMISGVMAAISGVLL 233

Query: 254 AARAQTAQAGMGVMYELDAIAAAVIGGTSLAGGAGRITGTVIGTIILGVMTSGFTFLRVD 313
           ++R  +AQ   G+ YELDAIAAAV+GGTSLAGG G + GT+IG +I+GVM +G   L V 
Sbjct: 234 SSRLFSAQTNAGMSYELDAIAAAVLGGTSLAGGVGTMVGTLIGALIIGVMNNGMNMLSVP 293

Query: 314 AYYQEIVKGLIIVAAVVADVYRQKKRAKR 342
            +YQ IVKGL+I+ AV  DV  + K+AKR
Sbjct: 294 YFYQLIVKGLVILVAVWLDV--RAKQAKR 320