Pairwise Alignments

Query, 365 a.a., periplasmic mannitol-binding protein from Agrobacterium fabrum C58

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 15/234 (6%)

Query: 7   MKKGALAGAAAT---ALAAPAIAQQNTKINWRLTSSFPKSLDTIYGGAEDIAKHVAAATD 63
           M+K  LA  A     + AAPA A+ N + N R+++   +    +  G + +   +   + 
Sbjct: 1   MRKLLLATTAIAFGLSAAAPAFAEFNDR-NIRVSNGINED-HPVGNGIKAMQACLDQKSG 58

Query: 64  GNFTIQPFAAGEIVPGLQAADAVSSGTVEMCHTCSYYYVGKDPTFAIGTAIPFGLNARLT 123
           G   +  F  G +   LQA  A+ SG  E   T S   VG  P   +   +PF       
Sbjct: 59  GKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFD-LPFLFANAQE 117

Query: 124 NSWFYEGNGNKLLNEFYAKHNLYGMISGNTGAQMGGWFRKEINTVDDFKGVKMRIA--GL 181
                +G+   ++NE      L  +     G +      + +   +DF+G+K+R+    +
Sbjct: 118 AYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQNNI 177

Query: 182 AGKVVEKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPY---DDHKLGFQKVAKY 232
                + LG     +A G+++ ALE   IDA E   PY   D  K  F +V KY
Sbjct: 178 FLDTFQNLGANATPMAFGEVFSALETKAIDAQE--NPYVTIDTSK--FFEVQKY 227