Pairwise Alignments

Query, 365 a.a., periplasmic mannitol-binding protein from Agrobacterium fabrum C58

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 28/225 (12%)

Query: 3   RRSFMKKGALAGAAATALAAPAIAQQNTKINWRLTSSFPKSLDTIYGGAEDIAKHVAAAT 62
           RR+F+  G +A  AA +LA P++ +       RL    P         A  + + + A T
Sbjct: 5   RRTFL--GGVAAGAALSLATPSLVRAQETRTLRLGIVTPPG-HPWNNAALKVGEALKAET 61

Query: 63  DGNFTIQPFAAGEIVPGLQAADAVSSGTVEMCHTCSYYYVGKDPTFAIGTAIPFGLNARL 122
           +G  +I  F AG++         + SG +++         G   T  +G+ IP    A +
Sbjct: 62  NGRLSISVFPAGQLGNEAAMLQQMQSGALDL---------GWIMTAELGSRIP--AVAAI 110

Query: 123 TNSWFYEGNGN-----------KLLNEFYAKHNLYGMISGNTGAQMGGWFRKEINTVDDF 171
              W  +               KLL+   A+    G+  G T  ++  +  KEI  +DD 
Sbjct: 111 NAPWVVDSTAKVAKLVREPVAMKLLDVLPAETGTVGLAWGITTMRVV-FSAKEIAGLDDI 169

Query: 172 KGVKMRIAGLAG--KVVEKLGVVPQQIAGGDIYPALEKGTIDAAE 214
            G+K+RI          + LG  P  I    ++ A+  G +D  E
Sbjct: 170 NGMKLRINTTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDGLE 214