Pairwise Alignments

Query, 489 a.a., TRAP dicarboxylate transporter subunit DctM from Agrobacterium fabrum C58

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (441), Expect = 6e-48
 Identities = 130/453 (28%), Positives = 221/453 (48%), Gaps = 38/453 (8%)

Query: 10  LMFLGMIIFMLYGFPVAFSLATVGLVFGVIGIFTEHFSPAFLQALPLRIFGIISNDL-LL 68
           L+F+ +I  M+ G P+A SL    ++F +        S A L ++   +F   +    LL
Sbjct: 5   LLFILVIGMMIVGVPIAISLGLSSILFLL------WHSDASLASVAQTLFNAFAGHYTLL 58

Query: 69  AIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIIVGAILGAITGTVAASVIT 128
           AIPFF      +   G+A+ ++     + G   GGLA A ++   +  A++G+  A+V+ 
Sbjct: 59  AIPFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVA 118

Query: 129 MGVISLPIMLKYGYNPRLATGVIAASGTITQVIPPSLVLIVLADQLGKSVGDMYLGAIGP 188
           +G I +  M+K GY+   A GVI  +GT+  +IPPS+V++V +     SVG M+LG + P
Sbjct: 119 IGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVP 178

Query: 189 SILQVTIFMLFILLMSIVRPKDLPALPPEARGELNRALVFRVLAGMIPSIVLIFLVLGTI 248
            +L     ML I +    R K+LP  P     E       +        ++L+ ++LG I
Sbjct: 179 GLL--AGLMLIIAIYITARIKNLPKQPFVGWKE-----ALKAAKEASWGLLLVVIILGGI 231

Query: 249 FLGLATPTEAGALGVVGAMVLA---------AAHRRLSWDLVKQGMHSTMH--------- 290
           + G+ TPTEA A+  V +  +A          A +  +  ++ + + + +H         
Sbjct: 232 YGGIFTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYD 291

Query: 291 ---ITSMVVFILVGATCFSLVFQGMDGSLWIEHMLSGIPGGPIGFLIFVNIFIFFLAFFL 347
              +T M++FI+  A     V         I   +     GPI FLI VN+ +     F+
Sbjct: 292 AGKLTIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFM 351

Query: 348 DFFEIAFIVIPMLAPIAQSLGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPRSVK 407
           +   +  IV P++ PIA +LGID I  G+++ +NM+   + PP G  LF    +A  S+ 
Sbjct: 352 EPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSM- 410

Query: 408 TSDIYMGAIPWLGMQLILVAIVIFWPESVTYWL 440
             ++   A+PW+G+  + + IV + P  V+ WL
Sbjct: 411 -MNVVKAALPWVGVMFLFLIIVTYVP-WVSTWL 441