Pairwise Alignments

Query, 417 a.a., D-amino acid dehydrogenase from Agrobacterium fabrum C58

Subject, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (358), Expect = 2e-38
 Identities = 116/418 (27%), Positives = 191/418 (45%), Gaps = 17/418 (4%)

Query: 8   DVLVIGTGIIGSMAALYLQNAGRDVVLLERGEVARGA---SSGNAGILAFPEIIPIPAPG 64
           +VLV+G+G++G  +A YL  AG DV +++R    RGA   S  NAG +++    P  APG
Sbjct: 3   EVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQP--RGAEETSFANAGQISYGYSSPWAAPG 60

Query: 65  IMKKAPRWLFDPLGPLSVPPAYAPKIAPWLWRFWRASAERNFRHGLKSLTEINRLAAVEM 124
           I +KA +W+ +   PL + P+  P +  W+ +         ++     +  I   +   +
Sbjct: 61  IPQKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECL 120

Query: 125 AHVAAMPELSHLVSKTGTLDLYDSEANLNAARRDWEEKQSAGFAFERVGRNEIDALQPGL 184
             +     L +   + GTL ++  E  L A  +D +    +G  FE +   +    +PGL
Sbjct: 121 KALNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGL 180

Query: 185 AP---QFRHAIFSADGLQVSDPYDFTRAIFDLVVARGASLR-KGEAERIDAVGESTIVTL 240
           AP   +    ++  D  +  D Y F + + +L   +G         +++   G+  I   
Sbjct: 181 APVQEKLVGGLWLPDD-ETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQ 239

Query: 241 ENGDKIDADKVVIAGGAWSKKLAETLGNIVPLETERGYNTTLPAGAFDLTRQLYFNDHGF 300
            +   + AD  V+A G++S  L + LG  +P+   +GY+ TLP        Q    D  +
Sbjct: 240 TDLGLLKADAYVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVMDETY 299

Query: 301 VV--TPLSTGIRVGGAVELGGLE-LKPNFRRAEAMLKKAGRFLPGLKLEGGQQWMGFRPS 357
            V  T  S  IRV G  EL G +   P  R+A   +     F  G     GQ W GFRP 
Sbjct: 300 KVALTRFSDRIRVAGTAELAGFDPAIPEARKATIEMVARDLFPHGGDFAKGQFWTGFRPM 359

Query: 358 MPDCLPVIGTARATPSVIYAFGHGHLGLTQSAATARLVTQLASGKETAIS---VDPFR 412
            PD  P+IG    T ++    GHG LG T +  +A ++  + +  E+ +S   +D FR
Sbjct: 360 TPDGTPIIGATPYT-NLYTNTGHGTLGWTMACGSASILADVLTHGESPLSRLGLDLFR 416