Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 277 a.a., ABC transporter for D-sorbitol, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  109 bits (273), Expect = 7e-29
 Identities = 78/278 (28%), Positives = 144/278 (51%), Gaps = 17/278 (6%)

Query: 39  ILYGTL-FVAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPWVKAWANACTGL 97
           +L GTL +VAA     P++ MV+TS K   EI   + FA P +  F P ++ +      L
Sbjct: 13  LLLGTLAWVAALLLFFPIFWMVLTSFK--TEI---DAFATPPQFIFMPTLENY------L 61

Query: 98  NCDGLSRGF---WNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSILIIGAFIPY 154
           +    S  F   WNSV I   +  + +++A  + Y+MA ++ K ++     ++    +P 
Sbjct: 62  HIQERSDYFHFAWNSVLISFSATALCMLIAVPAAYSMAFYETKRTKQTLLWMLSTKMLPP 121

Query: 155 QVMIYPIVIVLREMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFKAARIDGAN 214
             ++ PI ++ +  G+  T   L++++T+  +PI+  +   YF  +P E+ +AAR+DGA 
Sbjct: 122 VGVLMPIYLLAKGAGLLDTRIALIVIYTLINLPIVVWMIYTYFKDIPREILEAARLDGAT 181

Query: 215 FWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTRPEYYPMTVQLNNIVNSVQGV 274
             Q   R++LP+S       M+L +   WN+  + +  T     P+T  + +  +S +G+
Sbjct: 182 LGQEMLRVLLPISKGGLASTMLLSMILCWNEAFWSLNLTSSSAAPLTALIAS-YSSPEGL 240

Query: 275 KEYNVNMAATLLTGAVPLIVYFVSGRLFVRGIAAGAVK 312
               ++  +TL    + LI  ++S +  VRG++ GAVK
Sbjct: 241 FWAKLSAVSTLACAPI-LIFGWISQKQLVRGLSFGAVK 277