Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 270 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  120 bits (300), Expect = 5e-32
 Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 15/281 (5%)

Query: 36  RNIILYGTLFVAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPWVKAWANACT 95
           R  +LY TL + +A ++ P Y   +T++K   E+        P E  +E +  AW+    
Sbjct: 2   RKTVLYATLILLSALFIAPFYWTFMTAVKSTAELYRFPPVLWPSEWHWENFAAAWSKQPF 61

Query: 96  GLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSILIIGAFIPYQ 155
           G           NS+ ++V S +  ++ +S+  +  A ++F G +  F +L+    IP+ 
Sbjct: 62  GTYLS-------NSLIVVVLSTIGQLLSSSLVAFGFARFRFPGRDALFVLLLATMMIPWD 114

Query: 156 VMIYPIVIVLREMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFKAARIDGANF 215
           V + P+ +    +G   TL  L IV   F       L R Y  ++P E+ +AAR+DGAN 
Sbjct: 115 VKMIPLYMEFNMLGWINTLKPL-IVPAYFADAFFVFLLRQYIMTIPMEIDEAARMDGANS 173

Query: 216 WQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTRPE-YYPMTVQLNNIVNSVQGV 274
           + IY+RI LP+ LP  V+         WND+L  ++F   +  Y +T+ L    +  +G+
Sbjct: 174 FDIYWRIHLPLMLPALVLVGTFHFMNAWNDYLGPLIFLNDQSKYTLTLGL----SMFKGL 229

Query: 275 KEYNVN--MAATLLTGAVPLIVYFVSGRLFVRGIAAGAVKG 313
            E +V    A T++    PL ++F++ R  + G    +VKG
Sbjct: 230 HEIDVTSIAAITVILCLPPLALFFLAQRYIMDGAVGSSVKG 270