Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 282 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  110 bits (275), Expect = 4e-29
 Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 24/279 (8%)

Query: 27  RKPRKTFSRRNIILYGTLF-----VAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEI 81
           ++P+  FSR  + L   L+     + A   L PL  +V  + K   E    N+      I
Sbjct: 4   KRPQPFFSRSQVTLVRGLWMVVTAILAFMTLFPLLWIVSIAFKPAAESFSSNL------I 57

Query: 82  TFEPWVKAWANACTGLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMANWKFKGSEL 141
              P +  +    TG+      R   NS  +     V+++   +++GYA+A  +F G E+
Sbjct: 58  PQAPTLDNFIYVLTGVP---FIRYMVNSFLVSATVTVVALFFHTMAGYALARLRFPGREV 114

Query: 142 FFSILIIGAFIPYQVMIYPIVIVLREMGIYGTLTGLVI--VHTIFGMPILTLLFRNYFAS 199
            F  +     +   V+I P+ ++++ MG+  +  GL+I  +   FG+     L R Y+ S
Sbjct: 115 MFLSIFSTFLVSLPVIIVPLFVIVKAMGMLNSYAGLIIPAIFNAFGI----FLLRQYYLS 170

Query: 200 LPEELFKAARIDGANFWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTR-PEYY 258
           LP+E+ +AARIDGA +W+IY+ ++LP+S PI     IL     WN FL+ +  T  P+ +
Sbjct: 171 LPKEIEEAARIDGAGYWRIYWSVILPLSRPIMSALAILFFLANWNSFLWPLTITSDPDLW 230

Query: 259 PMTVQLNNIVNSVQGVKEYNVNMAATLLTGAVPLIVYFV 297
            + + + N  +  Q    +N  MAA+ +  A+P ++ FV
Sbjct: 231 VVQLGIANFKS--QYSASWNYMMAASTIV-AIPTLILFV 266