Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., carbohydrate ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  281 bits (718), Expect = 2e-80
 Identities = 137/286 (47%), Positives = 195/286 (68%), Gaps = 11/286 (3%)

Query: 28  KPRKTFSRRNIILYGTLFVAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPWV 87
           KP  + SR  I +Y  L +A   YL+PL VM++TS K   +I  GN+ + P  ++   WV
Sbjct: 7   KPAISLSR--IAIYAVLILAVLLYLVPLVVMLLTSFKTPEDISTGNLLSWPTVVSGIGWV 64

Query: 88  KAWANACTGLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSILI 147
           KAWA        DG    FWNS++I VP+V+IS  + +++GY ++ W+F+GS+LFF +L+
Sbjct: 65  KAWATV------DGY---FWNSIKITVPAVLISTAIGALNGYVLSFWRFRGSQLFFGLLL 115

Query: 148 IGAFIPYQVMIYPIVIVLREMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFKA 207
            G F+P+Q ++ P    L +MG+  T TGLV VH ++G+   TL FRNY+ S+P+ L KA
Sbjct: 116 FGCFLPFQTVLLPASFTLGKMGLASTTTGLVFVHVVYGLAFTTLFFRNYYVSIPDALIKA 175

Query: 208 ARIDGANFWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTRPEYYPMTVQLNNI 267
           AR+DGA F+ I+ +I+LPMS PI +V +I Q T IWNDFLFGVVF+  +  P+TV LNN+
Sbjct: 176 ARLDGAGFFTIFRQIILPMSTPIIMVCLIWQFTQIWNDFLFGVVFSSGDSQPITVALNNL 235

Query: 268 VNSVQGVKEYNVNMAATLLTGAVPLIVYFVSGRLFVRGIAAGAVKG 313
           VN+  G KEYNV+MAA ++ G   L+VY ++G+ FVRG+ AGAVKG
Sbjct: 236 VNTSTGAKEYNVDMAAAMIAGLPTLLVYVIAGKYFVRGLTAGAVKG 281