Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 282 a.a., binding protein dependent transport system permease from Phaeobacter inhibens DSM 17395

 Score =  152 bits (385), Expect = 7e-42
 Identities = 89/287 (31%), Positives = 154/287 (53%), Gaps = 10/287 (3%)

Query: 28  KPRKTFSRRNIILYGTLFVAA-AYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPW 86
           KP +  SR     Y  L  AA   +LLPL  + + S+K   +   GN +  P        
Sbjct: 4   KPIQNSSRAWQTTYQALVPAALVMWLLPLIAVAIFSIKPEADFTTGNYWGVPSSF----- 58

Query: 87  VKAWANACTGLNCDGLSRGFWNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSIL 146
            +  +N         + R   NSV I VP+V+ ++ ++ ++G+A+  +KF+G+ L F + 
Sbjct: 59  -EGLSNYGRVFFGSDMPRYLLNSVLITVPTVIGAVALSCMTGFALGVYKFRGNLLLFFMF 117

Query: 147 IIGAFIPYQVMIYPIVIVLREMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFK 206
           + G F+P+Q+++ P+  +  +MG+Y T TGLV+ H  F     TL  RN+  +LP EL +
Sbjct: 118 VAGNFVPFQILMVPVRDLTLDMGLYNTKTGLVLFHIAFQTGFCTLFMRNFIRALPFELIE 177

Query: 207 AARIDGANFWQIYFRIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTR-PEYYPMTVQLN 265
           AAR++G   W+I++ ++LP+  P      +L  T IWND+ + VV T+  E  P+T  + 
Sbjct: 178 AARVEGVAEWRIFWFVVLPLMKPAIAALSVLIFTFIWNDYFWAVVLTQGAESQPVTAGIT 237

Query: 266 NIVNSVQGVKEYNVNMAATLLTGAVPLIVYFVSGRLFVRGIAAGAVK 312
           +   + Q    Y++  A +++    P+ ++F+  R F+ G+  GAVK
Sbjct: 238 SF--NAQYRAAYHLMSAGSIVAALPPVAMFFLMQRHFIAGLTLGAVK 282