Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

 Score =  107 bits (266), Expect = 4e-28
 Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 12/270 (4%)

Query: 46  VAAAYYLLPLYVMVVTSLKGMPEIRLGNIFAPPVEITFEPWVKAWANACTGLNCDGLSRG 105
           +   Y LLP+  +   SLK    ++ G +   P  +TF+ +   +         D  S  
Sbjct: 15  LVVGYALLPVLWIFSLSLKPTSTVKDGKLI--PSTVTFDNYRGIFRG-------DLFSSA 65

Query: 106 FWNSVRILVPSVVISIVVASVSGYAMANWKFKGSELFFSILIIGAFIPYQVMIYPIVIVL 165
             NS+ I + + VI++V+ +++ YA+A  +F G  L     ++    P   ++ P+  + 
Sbjct: 66  LINSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIE 125

Query: 166 REMGIYGTLTGLVIVHTIFGMPILTLLFRNYFASLPEELFKAARIDGANFWQIYFRIMLP 225
           R +G++ T  GL++ +  F +P+       +F  +P +L KAA++DGA   Q + ++++P
Sbjct: 126 RAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVP 185

Query: 226 MSLPIFVVAMILQVTGIWNDFLFGVVFTRPE-YYPMTVQLNNIVNSVQGVKEYNVNMAAT 284
           ++ P  V A IL     WND L  +  T  +      V + N   S Q  +E   ++AA 
Sbjct: 186 LAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQ-FEEPTGSIAAG 244

Query: 285 LLTGAVPLIVY-FVSGRLFVRGIAAGAVKG 313
            +   +P+IV+  +  R  V G+ +GAVKG
Sbjct: 245 AIVITIPIIVFVLIFQRRIVAGLTSGAVKG 274