Pairwise Alignments

Query, 362 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 361 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  305 bits (782), Expect = 1e-87
 Identities = 158/290 (54%), Positives = 209/290 (72%), Gaps = 5/290 (1%)

Query: 2   NKSVSIRDLSLSFGAVTVLKDLNLDIYDGEFLVLLGSSGCGKSTLLNCIAGLLEPTDGQI 61
           NKSV + D+  S+G + V+  ++L I +G+F+V +G SGCGKSTLL  IAGL E ++G+I
Sbjct: 7   NKSVVLSDIRKSYGGLEVIHGIDLTIEEGDFVVFVGPSGCGKSTLLRMIAGLEEVSEGEI 66

Query: 62  FIKDRNVTWEEPKDRGIGMVFQSYALYPQMTVEKNLSFGLQVAKIPKDEIERRVKRAAGI 121
            IK R+VT  +P +RGI MVFQSYALYP M+V +NL FGL++A+    EI RRV + + I
Sbjct: 67  AIKGRDVTDLDPSERGIAMVFQSYALYPHMSVSENLGFGLKMARTDPAEIARRVAQVSAI 126

Query: 122 LQIEPLLKRKPAELSGGQRQRVAIGRALVRDVDVFLFDEPLSNLDAKLRSELRVEIKRLH 181
           L+I+ LL R+P +LSGGQRQRVAIGRA+VR  DVFLFDEPLSNLDA+LR  +R+EI RLH
Sbjct: 127 LKIDHLLDRRPGQLSGGQRQRVAIGRAIVRKPDVFLFDEPLSNLDAELRVSMRIEIARLH 186

Query: 182 QSLKNTMIYVTHDQIEALTLADRIAIMKSGVIQQLADPVTIYNKPRNLFVAGFIGSPSMN 241
           + L NTM+YVTHDQ EA+TLAD+I +++ G I+Q   P  +Y  P N+FVAGFIGSP MN
Sbjct: 187 RELGNTMVYVTHDQTEAMTLADQIVVLRDGRIEQAGSPRDVYEDPANMFVAGFIGSPRMN 246

Query: 242 FLRGELIEKDGKVVFTTNGVSFSLDGYQPETPLAAGRAVVLGVRPEHVRV 291
           FL  E  + DG +      +  ++DG      L  G  ++LG+RPEH+ V
Sbjct: 247 FLDAEW-QGDGTIRVGETTLEAAIDG----GSLKHGERLLLGIRPEHIAV 291