Pairwise Alignments

Query, 362 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 342 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, ATPase component (ThuK) (from data) from Sinorhizobium meliloti 1021

 Score =  293 bits (749), Expect = 6e-84
 Identities = 165/354 (46%), Positives = 222/354 (62%), Gaps = 31/354 (8%)

Query: 5   VSIRDLSLSFGAVTVLKDLNLDIYDGEFLVLLGSSGCGKSTLLNCIAGLLEPTDGQIFIK 64
           + +RD+  SFGA  V+K ++++I  GEF+V +G SGCGKSTLL  IAGL E T G +   
Sbjct: 4   LQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTLAFD 63

Query: 65  DRNVTWEEPKDRGIGMVFQSYALYPQMTVEKNLSFGLQVAKIPKDEIERRVKRAAGILQI 124
            + V    P  RGI MVFQSYALYP MTV +N++FG+Q+A   K +  +RV+ AA +LQ+
Sbjct: 64  GQIVNQLTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRVEAAAEMLQL 123

Query: 125 EPLLKRKPAELSGGQRQRVAIGRALVRDVDVFLFDEPLSNLDAKLRSELRVEIKRLHQSL 184
            P L+R P +LSGGQRQRVAIGRA+VRD  VFLFDEPLSNLDA LR   R+EI +LH+S+
Sbjct: 124 TPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIAKLHRSM 183

Query: 185 -KNTMIYVTHDQIEALTLADRIAIMKSGVIQQLADPVTIYNKPRNLFVAGFIGSPSMNFL 243
            K TMIYVTHDQ+EA+TLADRI +++ G+++Q+  P+ +Y  P ++FVAGFIGSP MNFL
Sbjct: 184 HKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGFIGSPKMNFL 243

Query: 244 RGELIEKDGKVVFTTNGVSFSLDGYQPETPLAAGRAVVLGVRPEHVRVDADILSGEVHEA 303
            G   E                  Y+ +T         +G+R EH+ +D     GE    
Sbjct: 244 SGAFAEP-----------------YKADT---------IGIRAEHLEIDEQ--GGEWSGT 275

Query: 304 VVDIEEPMGADNLIWLK-HAGHTMSVRVGGHRRFSPGTKVRLGLDLTMASLFDA 356
           V+   E +G+D+ I+L    G  + VR  G  +  PG  +R+         FDA
Sbjct: 276 VIH-SEMLGSDSYIYLDIGTGEPVIVRESGIAKHQPGQTIRISPAAGQVHRFDA 328