Pairwise Alignments

Query, 337 a.a., LacI family transcriptional regulator from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (285), Expect = 3e-30
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 3   LKEFAAKVGLSPTTVSRALGGYPEVREETRQRVMEAALKYGYRPNANAVRLATGRAGAIG 62
           +K+ A   G+S  TVSRAL    +V   TR+RV EA L+ GY PN+ A  L    +  I 
Sbjct: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTI- 62

Query: 63  VVMGRSGGGHFFSEFMGGMATRLENEETDILVSVTVDNNLDEELAIFSRLAASGRVDGII 122
           V +       +FSE + G+          +L+  +      E    F  L  + + DG++
Sbjct: 63  VAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENS--FVNLVFTKQADGML 120

Query: 123 VHSP-------RPEDERIALLNRLGVPFIVHGRSKTAFEHAWLDIDNHDVTYRPTIHFLE 175
           +          +PE + +        P ++        E   + IDN    +    +  +
Sbjct: 121 LLGTDLPFDVSKPEQKNLP-------PMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQ 173

Query: 176 RGHRRIALINGPVGRTFVQDREQGFREALATHGITPDPRFMMSEHFSEDAAFRFARSLLE 235
            GH+RIA I+GP      Q R QG+++AL   GIT +P +     F+ +A  +  R LL 
Sbjct: 174 LGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLA 233

Query: 236 QTPRPTAFVAGAMMTAQGVYRAATQLGLVIGKDVSVIAHDDVFPYLTPESMMPPLSTTRS 295
              +PTA        A G  + A +LGL + +D+SV+  DD+      +   PPL+T   
Sbjct: 234 LPEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDI---QFAQYCDPPLTTISQ 290

Query: 296 SMRMAGMRVTDLLLQIVGGRPVREVQELWPVELILRES 333
                G +   ++L+++ G  VR    L   +L++RES
Sbjct: 291 PRYEIGRQAMLMMLELLRGHDVRAGSRLLETKLVVRES 328