Pairwise Alignments

Query, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 594 a.a., ABC-type protease/lipase transport system, ATPase and permease components from Pseudomonas fluorescens FW300-N2E2

 Score =  368 bits (945), Expect = e-106
 Identities = 201/550 (36%), Positives = 316/550 (57%), Gaps = 4/550 (0%)

Query: 2   VVVMLFTVAINILLLAIPLYLFQISDRVLTSRSMDTLVMLTVAVLGAVLLQAFMDAIRRF 61
           + V  F+  IN L+L    Y+ Q+  RV+TS S+ TL MLT+ +   ++    ++ IR  
Sbjct: 21  ISVGFFSFFINALMLVPTFYMLQVYGRVITSGSLTTLTMLTLIMTALLVTLGSLEWIRSR 80

Query: 62  ILMRTAVELEVQLGAPILSAAARASLHGSGKDY--QTLQDLQQLRSFLTSGTLIAFLDAP 119
           +++R +  L+V L   +  A+ + +L   G D   Q+L DL  LR FL+   L AF DAP
Sbjct: 81  VMVRVSTRLDVLLSRQVYRASFKRALESGGMDASAQSLNDLTGLRQFLSGNGLFAFFDAP 140

Query: 120 LMPLFIVVVYLVHPHLGIIIMVCCVVLFGIAWLNQRFTARQFSEASGYLSRANFHLDSMS 179
            +P++I V++L HP  G +     ++L  +A++N+R T    ++A+     A  +     
Sbjct: 141 WLPIYIAVMFLFHPWFGWVATGSALLLLVLAFVNERLTGPVLAQANKEHIGATLYTTKSL 200

Query: 180 RNSQIINALAMIPEAVKMWGRETAGSLKSHVAAQDRNIMFSGVSKAARMVTQIALLGWGA 239
           RN+++I ++ M+   +  WGR     L    AA D   + S +S+  R++ Q  +LG GA
Sbjct: 201 RNAEVIESMGMLETLMDRWGRRQRNVLLLQSAASDSGAIISTLSRTFRILVQSLVLGLGA 260

Query: 240 HLSLSGELTGGMVIAASIISGRALAPIEGAIEGWHQFNKSAASYGRIKQLLINSPLNFPR 299
           +L++  ++  G+V A S++ GRALAPI+  I  W  F  + + Y R+  +L        R
Sbjct: 261 YLAVDHQVGAGLVFAGSVLLGRALAPIDLIIGSWKGFIAARSQYSRLNDILDKQQAQPER 320

Query: 300 LRLPNPEGRLDVERILFVPPPQKKVILNGISFSLKKGESLAIIGNSGSGKTTLGKMLVGS 359
           + LP P+G + VE ++   P  +  IL  ISFS   G  + +IG S +GK+TL + L+G 
Sbjct: 321 MSLPAPQGDVQVENLIVAAPGSRVPILKNISFSAPAGCMVGVIGPSAAGKSTLARALLGV 380

Query: 360 ILPTSGNVRLDLMDLRNWDQRQFGESIGYLPQDVQLFPGTIKANICRMRDDVEDRQIYEA 419
                G VRLD  D+  WD+ + G  IGYLPQD++LF GT+  NI R    V+  ++ +A
Sbjct: 381 WAAQHGVVRLDGADISTWDKHELGPYIGYLPQDIELFEGTLGENIARFA-GVDSVKVIQA 439

Query: 420 AVLADVHELIAGFPQGYETVVAADGAPLSGGQKQRIALARAFFGDPKFVVLDEPNSNLDT 479
           A +A VHE+I  FP GY+TV+ ++G  LS GQ+QRI LARA +G P+ +VLDEPNSNLD 
Sbjct: 440 ARIAGVHEMILQFPDGYDTVIGSEGLMLSAGQRQRIGLARALYGSPRLIVLDEPNSNLDD 499

Query: 480 AGEQALARALLHAKKQGITTVTITQRPALLQCVDKIMVLKDGSVAMFGERMDVLKALSGN 539
            G++ALA A+   ++ G T   IT R  ++  +D++MV+  G ++++G R  VL  L+  
Sbjct: 500 VGDRALAAAIQQLRQTGATLFVITHRTNIVSQLDRLMVMNAGIISLYGPREHVLAELNAQ 559

Query: 540 GRPAAQSPQI 549
            R  AQ P +
Sbjct: 560 -RQQAQMPAV 568