Pairwise Alignments

Query, 448 a.a., C4-dicarboxylate transporter DctA from Agrobacterium fabrum C58

Subject, 441 a.a., C4-dicarboxylate ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  528 bits (1360), Expect = e-154
 Identities = 262/416 (62%), Positives = 332/416 (79%)

Query: 13  KQPFYKHLYFQVLVAIIAGIALGHFYPTFGEQLKPLGDGFIRLVKMIIAPVIFLTVATGI 72
           K P YK LYFQVLVAI+ GI LGHFYP+ GE +KPLGDGF++L+KMIIAPVIF TV  GI
Sbjct: 5   KPPLYKSLYFQVLVAIVIGILLGHFYPSTGEAMKPLGDGFVKLIKMIIAPVIFCTVVIGI 64

Query: 73  AGMNDMKKVGRVAGKAMIYFLVFSTLALIVGLIVANTVQPGAGMNIDPATLDAKAVATYA 132
           AGM DMKKVG+  G A++YF V ST+ALI+GL++ N +QPG GMN+DPA+LD K++A Y 
Sbjct: 65  AGMEDMKKVGKTGGLALLYFEVVSTVALIIGLLLVNFLQPGVGMNVDPASLDTKSIAAYT 124

Query: 133 DKAHEQTITGFLMNIIPTTIVGAFASGDILQVLFFSVLFGIALGIVGEKGKPVTDFMHAM 192
                 ++T F++ IIPT++V AFA GD+LQVL  +VLFG AL   G +G  V DF+  +
Sbjct: 125 APGKMGSVTDFVLGIIPTSMVDAFAKGDVLQVLLVAVLFGFALHKFGGRGTLVFDFIEKI 184

Query: 193 MYPIFKLVAILMKAAPIGAFGAMAFTIGKYGISSVTNLAMLIGTFYITSALFVFVVLGAV 252
            + +F +V  +MK APIGAFGAM+FTIGKYG+ S+ +LA L+GTFY+T  LF+FVVLG +
Sbjct: 185 SHVLFSVVGAIMKVAPIGAFGAMSFTIGKYGVGSLFSLAKLMGTFYLTCLLFIFVVLGII 244

Query: 253 CRYNGFSIVALIRYIKEELLLVLGTSSSEAALPGLMSKMEKAGCKRSVVGLVIPTGYSFN 312
            R +GFSI   ++YIKEELL+VLGTSSSE+ LP +++KME AG K++VVGLVIPTGYSFN
Sbjct: 245 TRLHGFSIWKFVKYIKEELLIVLGTSSSESVLPRMLAKMENAGAKKTVVGLVIPTGYSFN 304

Query: 313 LDGTNIYMTLAALFIAQATGIHLSFGEQILLLLVAMLSSKGAAGITGAGFITLAATLSVV 372
           LDGT IY+T+AA+FIAQAT   ++F +++ LL V +L+SKGAAGITG+GFI LAATLS V
Sbjct: 305 LDGTAIYLTMAAVFIAQATNTPMTFVQELTLLGVLLLTSKGAAGITGSGFIVLAATLSAV 364

Query: 373 PSVPVAGMALILGIDRFMSECRALTNFVGNAVATIVVARWEGELDQEQLARVLSGK 428
             VPVAG+ALILGIDRFMSE RALTN +GN VAT+VVA+W GELD E+L +VL+ +
Sbjct: 365 GHVPVAGLALILGIDRFMSEARALTNTIGNGVATLVVAKWSGELDSERLTKVLNNE 420