Pairwise Alignments

Query, 418 a.a., D-amino acid dehydrogenase small subunit from Agrobacterium fabrum C58

Subject, 419 a.a., D-amino-acid dehydrogenase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  473 bits (1218), Expect = e-138
 Identities = 236/418 (56%), Positives = 284/418 (67%), Gaps = 1/418 (0%)

Query: 1   MNVTILGAGVVGVTSAWYLAKAGHKVTVIDRQPAAALETSFANAGEVSPGYSSPWAAPGI 60
           M V I+GAGV+GVT+A+YLAK G KV VIDRQ    LETS+ANAG++S G SSPWAAPGI
Sbjct: 1   MKVVIMGAGVIGVTTAYYLAKQGVKVVVIDRQTGPGLETSYANAGQLSYGMSSPWAAPGI 60

Query: 61  PMKAMKWLFMKHAPLIIRPTADPAAWRWMSQMLRNCTSARYAINKSRMVRVAEYSRDCLM 120
           P+KA+KW+FMK  PL I P   P  W+W  QMLRNC +  YAINK RMVRV+ YSRD + 
Sbjct: 61  PLKAVKWMFMKRRPLFIMPLLSPTMWKWCLQMLRNCNAESYAINKGRMVRVSSYSRDVMP 120

Query: 121 ALREETGIDYDQRMQGTLEVFRTQKQFDAIGKDVDVLTAGGVPFEILDRDGCAAIEPGLA 180
            L  +TGI+YD R  GTL++FRT KQ  A   D  VL   G P+E+L RD C  +EP LA
Sbjct: 121 DLIADTGIEYDGRQMGTLQLFRTAKQMKASKADQAVLAEYGSPYEVLGRDACIEVEPALA 180

Query: 181 PAKEKIVGGLRLPGDETGDCFMFTTELARMAEEAGVTFLYDTGIMRPIVEGGRIKAVET- 239
             + K VGGLRL  D TGDC MFT  L     E GV F Y   I    VE G+I  V+T 
Sbjct: 181 EVRGKFVGGLRLTSDRTGDCRMFTIALTDKCIEMGVEFQYGQTIKAIAVENGKISGVDTE 240

Query: 240 TRGLIEADIFVAALGSYSPQFVRQLGLTLPVYPVKGYSITVPIVKEERAPVSTVMDETFK 299
             G I  D +V A+GSY+   +  +G+ LPVYPVKGYS+T+P+  +  AP ST+MDET K
Sbjct: 241 IAGRISGDAYVCAMGSYAVNVLNPIGIRLPVYPVKGYSVTLPVTNDAFAPQSTIMDETHK 300

Query: 300 VAITRLGSRIRAGGMAEIAGFSKDLPAARQETLAHSVEDLFGGAGDQSQAKFWCGLRPMT 359
           VAITRLG RIR  G AEI G+S  L     +T+ H + DLF   GD S+A+ W GLRPMT
Sbjct: 301 VAITRLGDRIRVAGQAEIVGYSNRLGPHATDTVRHVIGDLFPKGGDLSRAEGWTGLRPMT 360

Query: 360 PDGTPVIGATRYSNLYLNTGHGTLGWTMSCGSARVLADLISGNKPEIDTHDLAISRYA 417
           PDGTPV+G TRY NL+LNTGHGTLGWTM+CGS R +AD++ G  PEI    L  +RYA
Sbjct: 361 PDGTPVLGPTRYENLFLNTGHGTLGWTMACGSGRAVADVVMGKPPEISMEGLTAARYA 418