Pairwise Alignments

Query, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 294 a.a., N-Acetyl-D-glucosamine ABC transport system, permease protein 1 from Xanthomonas campestris pv. campestris strain 8004

 Score =  177 bits (448), Expect = 3e-49
 Identities = 101/279 (36%), Positives = 149/279 (53%), Gaps = 4/279 (1%)

Query: 34  APAAILLSLIIVYPV-ARLVY--TSFFSLSLTSGLPAEFIGFENYTAMFDDPIFWETTWN 90
           AP+ ++L +    PV A LV   T F   +L       F+G  NY  +   P+FW++ WN
Sbjct: 14  APSILVLGMFFGVPVFAALVLSVTDFDLYALADSSHLRFVGLGNYIELLQTPLFWKSLWN 73

Query: 91  TVLITLITVPGALFMGLGLALLANLPFS-MQWPMRLSLLIPWALPLSFAGLIFAWFFHYE 149
           T    L+ VP ++ + LG ALL N   S  +   R +L  P    L    +I+ + FH +
Sbjct: 74  TTYFVLLGVPMSIAVSLGAALLLNAKASRFKALFRTALFAPVVTTLVAVAVIWRYLFHIK 133

Query: 150 YGVVNDVLNRLGFEGIIWFNSPNWAFAAICLTIIWKTSSFMALMILAGLQTIPRSLYEAA 209
           YG+VN  L+ LG   I W   P WA   I L  +WK   +  ++ LAGLQ IP+ LYEAA
Sbjct: 134 YGLVNFGLSHLGIAPIDWLGDPRWAMPTIMLFAVWKNFGYNMVIFLAGLQAIPQDLYEAA 193

Query: 210 DVDGAGKIRRFFEITLPLLKPSIVVALIFRTITALQTFDIPYMMTGGGPGTSTTTLAMYI 269
            +DGA + ++F  ITLP+L P ++V  +       Q F  PY+MT G P  ST ++  ++
Sbjct: 194 RIDGASRWKQFLHITLPMLGPVLMVVGVITISGYFQLFAEPYVMTRGDPLQSTVSVLYFM 253

Query: 270 HQNTVSFLDLGYGSALAVVMFALSMCVTAVYLRIIRTKD 308
            +    + +LG  SA+A ++F + + VT V LR  R KD
Sbjct: 254 FEEGFKWWNLGRASAVAFLLFLIILTVTTVMLRFGRKKD 292