Pairwise Alignments

Query, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 320 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

 Score =  178 bits (451), Expect = 2e-49
 Identities = 94/287 (32%), Positives = 163/287 (56%), Gaps = 12/287 (4%)

Query: 29  AVLLLAPAAILLSLIIVYPVARLVYTSFFSLSLTSGLPAEFIGFENY--------TAMFD 80
           A L L P  + L L+  +P+ R  + S     L+      F+G  NY        + +  
Sbjct: 29  AWLFLTPMLVCLVLVAAWPLLRTFWFSLTDADLSDTGSGSFVGLSNYLLYDGVIWSGVLV 88

Query: 81  DPIFWETTWNTVLITLITVPGALFMGLGLALLANLPFSMQWPMRLSLLIPWALPLSFAGL 140
           DP +W    NT+  T+++V   + +GL +ALL N+ F+ +  +R  +LIPWA+P   +  
Sbjct: 89  DPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVKFTGRALVRALILIPWAIPTIVSAK 148

Query: 141 IFAWFFHYEYGVVNDVLNRLGF--EGIIWFNSPNWAFAAICLTIIWKTSSFMALMILAGL 198
           I++W  + ++G++N ++  LG     + W    + +  A+ +  +WKT  F+ L++LA L
Sbjct: 149 IWSWMLNDQFGIINHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFVTLLMLAAL 208

Query: 199 QTIPRSLYEAADVDGAGKIRRFFEITLPLLKPSIVVALIFRTITALQTFDIPYMMTGGGP 258
           Q +P   YEAA VDG   +R F+ +TLPLL P+++VA IFR + +L+ FD+ Y++T    
Sbjct: 209 QMLPSDCYEAARVDGIHPVRVFWRVTLPLLMPALLVAAIFRILDSLRVFDVIYVLTSN-- 266

Query: 259 GTSTTTLAMYIHQNTVSFLDLGYGSALAVVMFALSMCVTAVYLRIIR 305
            +ST ++++Y  Q+ V F D+GYGSA + ++F +   +  +YL + R
Sbjct: 267 SSSTMSMSVYARQHLVEFQDVGYGSAASTLLFLVVAVIAMLYLYLGR 313