Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 568 a.a., ABC transporter ATP-binding protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  521 bits (1342), Expect = e-152
 Identities = 274/570 (48%), Positives = 391/570 (68%), Gaps = 23/570 (4%)

Query: 15  VLSVRNLTTSFH--VDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRE 72
           +L+V +L   F+   +  W   V+ ISF V  G  + IVGESGSGKSVTS SIMRL D  
Sbjct: 1   MLNVEHLNIDFYNQEEKTWFKAVKQISFKVKKGTVLGIVGESGSGKSVTSFSIMRLHDER 60

Query: 73  SSRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQ 132
           ++++ GEI     +LL+LS + +R++RGN+++MIFQEPMTSLNP+FT G Q++EA++ H+
Sbjct: 61  AAKITGEIDFEDISLLNLSSNEIRQIRGNQISMIFQEPMTSLNPVFTCGYQVAEAIMLHR 120

Query: 133 PMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEP 192
            + +AEA+  T+ L  +V++P     F+ YPH+ SGG +QRVMIAMAL+  PKLLIADEP
Sbjct: 121 KVDQAEAKKHTIALFNEVQLPRPEKIFESYPHQISGGQKQRVMIAMALSCDPKLLIADEP 180

Query: 193 TTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATAD 252
           TTALDVT+Q  IL L+  L++E   +++FI+HD+GVV EIAD   VMY+GE VE G    
Sbjct: 181 TTALDVTVQKTILQLLLKLKQERNMAMIFISHDLGVVNEIADEVAVMYKGEIVEQGPAKS 240

Query: 253 IFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIV-NTATGETQ------EPVRPADTVD 305
           IF   +HPYT+ LL+  P         +  + P+V +  TGE +      +      T +
Sbjct: 241 IFENPQHPYTKGLLACRP-----SPNRQLKKLPVVADFLTGEIEDASAHLQASNQLTTAE 295

Query: 306 ASA--------QPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGES 357
            +A        +P+L+++ L   + IH+GL G+ +  V AV+ ++F++  GETL LVGES
Sbjct: 296 ITARRAKLYAQEPLLQIKNLCTWYPIHNGLFGKTTDYVKAVDQLNFEVFPGETLGLVGES 355

Query: 358 GCGKSTTGRAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMT 417
           GCGK+T GR I+RLI+P +G ++ NGENI  + K+ +R++RK +Q+IFQDP+ASLNP+++
Sbjct: 356 GCGKTTLGRTILRLIQPTSGEIIFNGENITHIGKTALRKLRKDIQIIFQDPYASLNPKLS 415

Query: 418 VGAAIAEPFLEHRM-GSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARAL 476
           +G +I EP   H++  +  E K+ V ++L+KVGL  +   RYPHEFSGGQRQR+ IARAL
Sbjct: 416 IGQSILEPLQVHKLYRNDSERKQKVLELLDKVGLKEEHFNRYPHEFSGGQRQRVVIARAL 475

Query: 477 ALQPKVIVADESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMY 536
           ALQPK I+ DESVSALDVS++AQV+NL+ DLQ    L ++FISHD+AVV+ +S R+ VM 
Sbjct: 476 ALQPKFIICDESVSALDVSVQAQVLNLIKDLQSEFGLTYIFISHDLAVVKHISDRILVMN 535

Query: 537 LGEIVEIGPRADVFDNPQHDYTRKLMAAVP 566
            G+I E G    +F  P+  YT+KL+ A+P
Sbjct: 536 KGKIEEEGFPEQIFYAPKAAYTQKLIEAIP 565



 Score =  194 bits (494), Expect = 7e-54
 Identities = 111/281 (39%), Positives = 168/281 (59%), Gaps = 11/281 (3%)

Query: 337 AVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEPDA----GSVVVNGENILTLDKS 392
           AV+ +SF ++ G  L +VGESG GKS T  +IMRL +  A    G +     ++L L  +
Sbjct: 22  AVKQISFKVKKGTVLGIVGESGSGKSVTSFSIMRLHDERAAKITGEIDFEDISLLNLSSN 81

Query: 393 GMREMR-KTVQMIFQDPFASLNPRMTVGAAIAEPFLEHRMGSAREAKEVVADMLNKVGLS 451
            +R++R   + MIFQ+P  SLNP  T G  +AE  + HR     EAK+    + N+V L 
Sbjct: 82  EIRQIRGNQISMIFQEPMTSLNPVFTCGYQVAEAIMLHRKVDQAEAKKHTIALFNEVQLP 141

Query: 452 --PDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQ 509
               +   YPH+ SGGQ+QR+ IA AL+  PK+++ADE  +ALDV+++  ++ L+L L+Q
Sbjct: 142 RPEKIFESYPHQISGGQKQRVMIAMALSCDPKLLIADEPTTALDVTVQKTILQLLLKLKQ 201

Query: 510 SLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPD 569
             ++A +FISHD+ VV  ++  VAVMY GEIVE GP   +F+NPQH YT+ L+A    P 
Sbjct: 202 ERNMAMIFISHDLGVVNEIADEVAVMYKGEIVEQGPAKSIFENPQHPYTKGLLAC--RPS 259

Query: 570 PDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSPGHLVA 610
           P+R+  +     D L   I   D +A+ +A  +++   + A
Sbjct: 260 PNRQLKKLPVVADFLTGEIE--DASAHLQASNQLTTAEITA 298