Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 618 a.a., dipeptide ABC transporter ATP-binding protein from Pantoea sp. MT58

 Score =  667 bits (1721), Expect = 0.0
 Identities = 353/605 (58%), Positives = 442/605 (73%), Gaps = 9/605 (1%)

Query: 11  AEDAVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLD 70
           A + VL+VR+L   F  +      VR +S D+  GET+A+VGESGSGKSVTSL++MRL++
Sbjct: 11  APEQVLAVRDLNVRFQHEDTVTDAVRHLSLDLFRGETLALVGESGSGKSVTSLALMRLIE 70

Query: 71  RESSRVQGEILLGGRN-----LLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQIS 125
           +    V GE+ L  RN     L+  S+  MRRVRG ++AMIFQEPMTSLNP+F++G+QI+
Sbjct: 71  QAGGIVSGEVQLRRRNGDVLDLMRASKGQMRRVRGADMAMIFQEPMTSLNPVFSVGEQIA 130

Query: 126 EALLCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPK 185
           E++  HQ +S A A AE  R+L+ VRIP A +    +PH+ SGGMRQRVMIAMAL  KP 
Sbjct: 131 ESIRLHQGLSHAGALAEARRMLDLVRIPDAQNVLSRFPHQLSGGMRQRVMIAMALCCKPA 190

Query: 186 LLIADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQV 245
           LLIADEPTTALDVTIQ QIL LI+ LQ+E    V+FITHDMGVVAE+ADR  VMYRGE V
Sbjct: 191 LLIADEPTTALDVTIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEMADRVQVMYRGEVV 250

Query: 246 EVGATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQEPVRPADTVD 305
           E    A++F   + PYT+ALL+AVP LGSM+G+  P +FP++++   +      P DTV 
Sbjct: 251 ENAPVAELFSAPQQPYTQALLAAVPKLGSMQGQPLPAKFPLLHSDAVDDV----PQDTVR 306

Query: 306 ASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTG 365
               P+L+V  L  RFDI  GLL R+  RVHAVE VSFDL AGETL+LVGESGCGKSTTG
Sbjct: 307 RLQPPILQVRDLVTRFDIRGGLLNRVKSRVHAVEKVSFDLYAGETLALVGESGCGKSTTG 366

Query: 366 RAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEP 425
           R++++L+    G++  +G+ I  L  + +  +R+ +Q IFQDP+ASL+PR+TVG +I EP
Sbjct: 367 RSLLKLVASQGGTLTFDGQRIDHLSGAALAHLRRDIQFIFQDPYASLDPRLTVGFSIMEP 426

Query: 426 FLEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVA 485
            L H+    REA++ VA +L+KVGL P+ A RYPHEFSGGQRQRICIARALAL PKV++A
Sbjct: 427 LLVHKAMPRREAEQRVAWLLDKVGLLPEHAQRYPHEFSGGQRQRICIARALALNPKVVIA 486

Query: 486 DESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGP 545
           DESVSALDVSI+AQ+INLMLDLQ+   +AFLFISHDMAVVER+SHRVAVMYLG+IVE+GP
Sbjct: 487 DESVSALDVSIQAQIINLMLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEMGP 546

Query: 546 RADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSP 605
           R  VF+ PQH YTRKLMAAVPV DP  R   R    DE+ SPI  +          EV+P
Sbjct: 547 RQAVFEQPQHPYTRKLMAAVPVADPAHRRRERALLVDEIPSPIHALGDEPEVAPLMEVAP 606

Query: 606 GHLVA 610
           GH VA
Sbjct: 607 GHFVA 611