Pairwise Alignments

Query, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 617 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  665 bits (1715), Expect = 0.0
 Identities = 352/605 (58%), Positives = 442/605 (73%), Gaps = 11/605 (1%)

Query: 15  VLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRESS 74
           VL V +L+  F         VRD+SF V  GET+AIVGESGSGKSV+SL+IMRL++    
Sbjct: 7   VLDVNHLSVRFSTSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGG 66

Query: 75  RVQGEILL-----GGRNLLSLSEDA-MRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEAL 128
           ++    +      G R  L+ +++A MR +RG E+AMIFQEPMTSLNP+FT+G+QI+E++
Sbjct: 67  KIASGSMQFLRRSGQRLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESI 126

Query: 129 LCHQPMSKAEARAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLI 188
             HQ + +A A+AE +R+LE VRIP A      +PH+ SGGMRQRVMIAMAL+ KP LLI
Sbjct: 127 RLHQGLGRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLI 186

Query: 189 ADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVG 248
           ADEPTTALDVTIQ QIL LI++LQ+E    V+FITHDMGVVAE+ADR VVM RGE+VE  
Sbjct: 187 ADEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEEN 246

Query: 249 ATADIFHRGKHPYTRALLSAVPVLGSMKGEERPLRFPIVNTATGETQ---EPVRPADTVD 305
           A   +F    HPYT++LL+AVP LGSM+G ++PLRF I   A          ++    + 
Sbjct: 247 AVNPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGIAPQAEARPDLIASELQAQAEIA 306

Query: 306 ASAQPVLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTG 365
           A  QP+LKV  LT RFD+ SG+ GR+  RVHAVE VSFDL AGETL++VGESGCGKSTTG
Sbjct: 307 AQRQPILKVRDLTTRFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGCGKSTTG 366

Query: 366 RAIMRLIEPDAGSVVVNGENILTLDKSGMREMRKTVQMIFQDPFASLNPRMTVGAAIAEP 425
           R+++RL++   G V   G ++  L +S +R++R+ +Q IFQDPFASL+PRMTVG +I EP
Sbjct: 367 RSLLRLVDIAGGKVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVGYSIMEP 426

Query: 426 FLEHRMGSAREAKEVVADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVA 485
            L H  G    A+E V  +L +VGL+P+   RYPHEFSGGQRQRICIARALAL PK+++A
Sbjct: 427 MLVH--GMKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPKIVIA 484

Query: 486 DESVSALDVSIKAQVINLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGP 545
           DESVSALDVSI+AQ++NLMLDLQ  L ++F+FISHDMAVVER+SHRVAVMYLG+IVEIGP
Sbjct: 485 DESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGP 544

Query: 546 RADVFDNPQHDYTRKLMAAVPVPDPDRRNTRRGAANDELKSPIRPVDYTANPRAYREVSP 605
           R  +F+NPQH YTRKLMAAVPV DP  R   +    DE+ SPIR V         +EV+P
Sbjct: 545 RRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIRRVGDEPKVEPLQEVAP 604

Query: 606 GHLVA 610
           GH VA
Sbjct: 605 GHFVA 609