Pairwise Alignments

Query, 332 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (288), Expect = 2e-30
 Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 7/279 (2%)

Query: 59  VEAKLPGRFHFNIVKSGALGGEKEVAENIRLGSVQASLSTVSSLSGWVPELQILDLPFLF 118
           +E +  G   F +   G LG EKEV E ++ G+VQ +  ++  +   VP++ + +LPF+F
Sbjct: 51  LEEQSKGEISFKMYAGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVF 110

Query: 119 RDSEHVRKVVTGETGEELKTKLAAQQF--VAADFINYGARHLLAKEPVTRPEQLKGKKIR 176
            D  H+R ++ G+ G+E+  K+   +F  VA  +++ G R+L  K+PV +   LKG KIR
Sbjct: 111 HDQAHMRTIIDGQIGQEILDKITNSEFNMVALAWMDGGTRNLYTKKPVRQISDLKGMKIR 170

Query: 177 VIQSPLHTKLWSAFGMTPVGIPITETYNALATGVADAMDLTKSAYAGFKLYEVVPYLTET 236
           V  +P+  +  +  G   + +   E ++AL TGV D  +     Y     Y+   + T T
Sbjct: 171 VQGNPVFIETINDMGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMT 230

Query: 237 GHIWATGVVYYGAAFWNQLDDEEKKVFLEASSEGARYFNQLIVEDEVKSVDLALSKGGK- 295
            H+     +      W +L+ E++ +  + + E A+   +++ +      +  L   G  
Sbjct: 231 EHLILPEPIVMSKTTWEKLNPEQQALVKKLARE-AQMEERVLWDKSSADAETKLKAAGVE 289

Query: 296 --VLQPEMLDEWRKGAQGVWQDFAGIVGGL-EKIEAIQS 331
              L PE    +    Q V   +     GL ++I A+Q+
Sbjct: 290 FITLTPEQKKAFYDATQPVRDKYGAKYKGLIDRIGAVQT 328