Pairwise Alignments

Query, 324 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 26/291 (8%)

Query: 7   TLMGATAAILLSALAAQ----AETTLKWAHVYETSEPFHTDSVWAA---EEIAKRTDGRY 59
           TL+ A+   + S  AA      E  +K++HV  T +  H   + A+   + + +  +G+ 
Sbjct: 6   TLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDK--HPKGIAASLLEKRVNEEMNGKA 63

Query: 60  KVDVFPASQLGKEADINQGLKIGTVDIIISGSSFAARDFKPIGVTYFPYIFRDPSHLIAY 119
            + VFP S L  +  + + L  G V +     S   +  K   +   P++F D   +   
Sbjct: 64  CMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAV--- 120

Query: 120 TKSDIFKRLAKGYEDK---TGNHIAAVSYY--GTRHTTSNKPIAACADMAGLKMRVPDVP 174
              D F+  AKG E K   T   +  + ++  G +  ++NKPI   AD  GLK RV    
Sbjct: 121 ---DRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASD 177

Query: 175 AYLAMPRACGANTTPIAFAEVYLALQNGTVDAQENPLTTIEAKKFFEVQKNIVLTGH-IV 233
             +A     GAN   ++FAE Y  LQ   +D QEN  + I  +K+FEVQ     T H I+
Sbjct: 178 VLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGIL 237

Query: 234 DHLNTVVSKNLWSKL----SDEDKKIFTDVMQEAAERTTKTIEGREKSLVE 280
           D+L  V S   W  L     D+  KI  +V  E    + K  E  ++ ++E
Sbjct: 238 DYL-VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIE 287