Pairwise Alignments

Query, 324 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (445), Expect = 9e-49
 Identities = 103/297 (34%), Positives = 155/297 (52%), Gaps = 2/297 (0%)

Query: 5   LSTLMGATAAILLSALAAQ--AETTLKWAHVYETSEPFHTDSVWAAEEIAKRTDGRYKVD 62
           + T+   T AIL  + AA   A TTLK           +  +   A+ + + + G  K+ 
Sbjct: 1   MKTINKITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLA 60

Query: 63  VFPASQLGKEADINQGLKIGTVDIIISGSSFAARDFKPIGVTYFPYIFRDPSHLIAYTKS 122
           ++P++QLG +  + Q L +G +DI  +                 PY+ +D  HL    +S
Sbjct: 61  LYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFES 120

Query: 123 DIFKRLAKGYEDKTGNHIAAVSYYGTRHTTSNKPIAACADMAGLKMRVPDVPAYLAMPRA 182
           D  + +      K         Y GTR TTSN+P+ +  D  GLK+RVP+    L   + 
Sbjct: 121 DFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKL 180

Query: 183 CGANTTPIAFAEVYLALQNGTVDAQENPLTTIEAKKFFEVQKNIVLTGHIVDHLNTVVSK 242
            GA+ TP++F+EVYLALQ   VD QENPL TI+  KF+EVQKN+ +T HIV+    ++S+
Sbjct: 181 SGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISE 240

Query: 243 NLWSKLSDEDKKIFTDVMQEAAERTTKTIEGREKSLVEDFKKRGLNVAEVDKADFEK 299
           + W KLSD DK I    +Q+  +  T+T++ +E  LV  FK  G+NV   D   F +
Sbjct: 241 STWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFRE 297