Pairwise Alignments

Query, 324 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 336 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  131 bits (329), Expect = 3e-35
 Identities = 96/320 (30%), Positives = 145/320 (45%), Gaps = 33/320 (10%)

Query: 1   MKIRLSTLMGATAAILLSAL----AAQAETTLKWAHVYETSEPFHTDSVWAAEEIAKRTD 56
           MK+   T++  T A+ L A     A  A+ T K A+    + P +     AA++I + T 
Sbjct: 1   MKMTRRTMLLGTGAVALGASIRTKAHAADFTYKLANNLPVTHPLNIRLKEAADKILEETG 60

Query: 57  GRYKVDVFPASQLGKEADINQGLKIGTVDII---------------ISGSSFAARDFKPI 101
           GR K+++FP+SQLG + +    L+ G  +                 ISG  FA  D+  +
Sbjct: 61  GRLKINIFPSSQLGNDTETLSQLRNGATEFFSLSPLILSTLVPNAAISGIGFAFPDYDTV 120

Query: 102 GVTYFPYIFRDPSHLIAYTKSDIFKRLAKGYEDKTGNHIAAVSYYGTRHTTSNKPIAACA 161
                         L AY + +I K+     E    N    +       T+SNKPI    
Sbjct: 121 WKAM-------DGELGAYARGEIEKKGLVPMEKIWDNGFRQI-------TSSNKPINTPE 166

Query: 162 DMAGLKMRVPDVPAYLAMPRACGANTTPIAFAEVYLALQNGTVDAQENPLTTIEAKKFFE 221
           D+ G K+RVP  P + +M  A GA  T I FAEVY AL  GTVD QENPL      K +E
Sbjct: 167 DLKGFKIRVPPSPLWQSMFTAFGAAPTTINFAEVYTALSTGTVDGQENPLAIASTAKLYE 226

Query: 222 VQKNIVLTGHIVDHLNTVVSKNLWSKLSDEDKKIFTDVMQEAAERTTKTIEGREKSLVED 281
           VQK+  +T H+ D    + +K  W  L ++ ++I    + E+A            ++ E 
Sbjct: 227 VQKHCAMTNHMWDGFWMLANKQAWETLPEDIREIAAKHLNESAIAQRTDTAKVNDTVREQ 286

Query: 282 FKKRGLNVAEVDKADFEKNV 301
             + G+   + DKA F + +
Sbjct: 287 LTQSGMTFTDPDKAAFRETL 306