Pairwise Alignments

Query, 324 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 334 a.a., TRAP-type periplasmic solute-binding protein from Sinorhizobium meliloti 1021

 Score =  102 bits (255), Expect = 1e-26
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 6/262 (2%)

Query: 53  KRTDGRYKVDVFPASQLGKEADINQGLKIGTVDIIISGSSFAARDFKPIGVTYFPYIFRD 112
           +++ G+ K+  F    LG +    Q L+ G  + +++ SS        +GV   P++F +
Sbjct: 55  QKSGGKLKLTAFWGGALGGDLQATQALRSGVQEAVVTSSSPLVGIIPALGVFDLPFLFAN 114

Query: 113 PSHLIAYTKSDIFKRLAKGYEDKTGNHIAAVSYYGTRHTTSNKPIAACADMAGLKMRVPD 172
                     D    + +  E     ++A         + S +P+    D  G+K+RV  
Sbjct: 115 AQEAYTVLDGDFGDMMNEKLEAAGLVNLAYWENGFRNLSNSVRPVTKWEDFEGMKVRVMQ 174

Query: 173 VPAYLAMPRACGANTTPIAFAEVYLALQNGTVDAQENPLTTIEAKKFFEVQKNIVLTGHI 232
              +L   +  GAN TP+AF EV+ AL+   +DAQENP  TI+  KFFEVQK +  T H 
Sbjct: 175 NNIFLDTFQNLGANATPMAFGEVFSALETKAIDAQENPYVTIDTSKFFEVQKYVTETNHA 234

Query: 233 VDHLNTVVSKNLWSKLSDEDKKIFTDVMQEAAERTTKTIEGREKSLVEDFKKRGLNV--- 289
                 + SK ++   + E++    +      +   K I+   K  +E  K+ GL V   
Sbjct: 235 YTPFLFLFSKPIFDSYTPEEQAALRECAVVGRDEERKVIQDLNKKSLEKIKEAGLEVNTL 294

Query: 290 -AEVDKADFEKNVI--EKVKFE 308
            AE      EK+++  EK K E
Sbjct: 295 SAEEQARIREKSMVVYEKHKAE 316