Pairwise Alignments

Query, 324 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 344 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score =  124 bits (310), Expect = 4e-33
 Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 12/299 (4%)

Query: 6   STLMGATAAILLSALAAQAETTLKWAHVYETSEPFHTDSVWAAEEIAKRTDGRYKVDVFP 65
           S    A A  L+S  A  AE T K+A+    + P +  +   A  IA+++ GR ++ ++P
Sbjct: 18  SVASAAAATGLVSTSAHAAEFTFKYANNLPVTHPMNARAKEMAAAIAEQSKGRIELQLYP 77

Query: 66  ASQLGKEADINQGLKIGTVDI-----IISGSSFAARDFKPIGVTYFPYIFRDPSHLIAYT 120
            +QLG + D+   ++ G +D      +I G+   A     IG     + F+D S +    
Sbjct: 78  NNQLGTDTDMLSQVRAGAIDFFTLSPLILGTLVPAAQISGIG-----FAFKDYSQVWPAM 132

Query: 121 KSDIFKRLAKGYEDK-TGNHIAAVSYYGTRH-TTSNKPIAACADMAGLKMRVPDVPAYLA 178
             ++   + K  E + T      +   G R  T S KPI    D+ G+K+RVP  P + +
Sbjct: 133 DGELGAHVRKQIEARSTLFAFEKIWDNGYRQITNSTKPIKVAEDLKGMKLRVPPSPLWTS 192

Query: 179 MPRACGANTTPIAFAEVYLALQNGTVDAQENPLTTIEAKKFFEVQKNIVLTGHIVDHLNT 238
           M +A  A  T I FAEVY ALQ   V+ QENP+  I   K +EVQK   +T H+ D    
Sbjct: 193 MFKAFDAAPTSINFAEVYSALQTKIVEGQENPMAIISTAKLYEVQKYCSITNHMWDGFWF 252

Query: 239 VVSKNLWSKLSDEDKKIFTDVMQEAAERTTKTIEGREKSLVEDFKKRGLNVAEVDKADF 297
           + +K  + +L  + +++ T ++ EA       +     SLV++ K +GL     D   F
Sbjct: 253 LGNKKSFERLPKDLQELMTRIINEAGVNQRADVRKLNDSLVDEMKGKGLAFNNADADSF 311