Pairwise Alignments

Query, 310 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 303 a.a., sugar ABC transporter permease from Rahnella sp. WP5

 Score =  152 bits (384), Expect = 1e-41
 Identities = 89/266 (33%), Positives = 136/266 (51%)

Query: 34  VFLPPALLLFTLFVILPMGEAAWYSLYRWNGYGTPTDFVGLKNFQVLFGNAAFSQALMNN 93
           + L PAL    LF   P     W SL+     G P  FVGL N++ L  +  F  +L NN
Sbjct: 24  LLLLPALGFLLLFTHYPALATVWESLFSAARSGHPPQFVGLDNYRALLDDDVFMLSLRNN 83

Query: 94  GLIILISILIQIPLAIWLAMMLAHRIPGVVAFRLVFFLPYVLADVAAGLIWRFVYDGDYG 153
            L  LI+I + + LA+ +A+ +  R+ G    R  FF+P +L  VA   +W F Y    G
Sbjct: 84  LLYALITIPLSVALALLMALAVNRRLRGNALTRAAFFIPSLLPMVAIANLWLFFYTPQLG 143

Query: 154 LFAAISNFFGFANPYVLADKDVAIYAVLGVIVWKYFGFHMMLFIAGLQSVDKNVLEAAEI 213
           L   +   F       L +   A+Y+++ V VW+  GF M+ ++A LQ +D  + EAAEI
Sbjct: 144 LLNKMLALFSLPAVNWLGEPGTALYSLMAVSVWREAGFFMIFYLAALQQIDPRLAEAAEI 203

Query: 214 DGASGWQKFRYVTLPMLGSTVRLSVFFAVIGSLQLFDMIMPLTGGGPSNSTQTMVTFLYT 273
           +GAS    FR V  P+L  T    +  A + + ++ D ++ +T GGP+NST  ++ ++Y 
Sbjct: 204 EGASRRYFFRRVQWPLLMPTTLFVLINASMNAFRIVDQVIAMTNGGPNNSTSLLLFYIYR 263

Query: 274 YGVMRMQVGLGSAVGVVLFVICVTLA 299
                  +   SA+ VVL VI   +A
Sbjct: 264 TAFSYWDLPAASAMTVVLLVILAVIA 289