Pairwise Alignments

Query, 310 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 311 a.a., sugar ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  165 bits (417), Expect = 1e-45
 Identities = 97/291 (33%), Positives = 161/291 (55%), Gaps = 15/291 (5%)

Query: 4   ISMTSASIPARRAAKRKQSSVAHDRALTLLVFLPPALLLFTLFVILPMGEAAWYSLYRWN 63
           ++ T+AS P R AA+R +++           FL PA ++  ++V+ P+    + S + W+
Sbjct: 19  VATTAASGPQRSAARRNRAA---------FWFLAPACVMTLVYVLYPILYTIYLSFFSWD 69

Query: 64  GYGTPTDFVGLKNFQVLFGNAAFSQALMNNGLIILISILIQIPLAIWLAMMLAHRIPGVV 123
           G   P  FVGL N+  LF    F  AL NN L +L+ +L   P+ + +A+ L  ++ G+ 
Sbjct: 70  GMTEPR-FVGLANYVELFHAPTFYTALKNNVLWLLMFLLAP-PMGLAIALYLNQKVIGMR 127

Query: 124 AFRLVFFLPYVLADVAAGLIWRFVYDGDYGLFAAISNFFGFANPYVLADKDVAIYAVLGV 183
             + +FF P+VL+ V  GL++ + YD  +GL   +S  FG   P VL D   A + ++  
Sbjct: 128 VVKSLFFAPFVLSGVVVGLMYSWFYDPSFGL---LSLLFGQGVP-VLGDARYATFGIIFA 183

Query: 184 IVWKYFGFHMMLFIAGLQSVDKNVLEAAEIDGASGWQKFRYVTLPMLGSTVRLSVFFAVI 243
            +W    + M+LF+ GL +++ + +EAA ++GA GW   RYV LP L ST  ++   ++I
Sbjct: 184 ALWPQTAYCMILFLTGLTALNHDQVEAARMEGAKGWTMLRYVILPQLRSTTFMAFVVSII 243

Query: 244 GSLQLFDMIMPLTGGGPSNSTQTMVTFLYTYGVMRMQVGLGSAVGVVLFVI 294
           G+L+ FD+I  +T GGP  S+  +  + Y   +   + G  +AV V LF I
Sbjct: 244 GALRSFDLISVMTSGGPYESSTVLAYYAYDQAIKYYRQGYSAAVAVTLFAI 294