Pairwise Alignments

Query, 310 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 315 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  144 bits (363), Expect = 3e-39
 Identities = 88/314 (28%), Positives = 172/314 (54%), Gaps = 15/314 (4%)

Query: 1   MTDISMTSASIPARRAA----KRKQSSVAHDRALTLLVFLP-PALLLFTLFVILPMGEAA 55
           M+  + T  + PA ++A    K+K S+ +  +      ++  PA ++F  F+ LP  +  
Sbjct: 1   MSHATATKTAAPAAKSAAKKPKKKVSAFSTRKVDPAYYWMAVPAAIIFAFFLYLPFLDGV 60

Query: 56  WYSLYRWNGYGTPTDFVGLKNFQVLFGNAAFSQALMNNGLI-ILISILIQIPLAIWLAMM 114
            YS     GYG    F+GLKN+  LF +     A +    I ILI++LI + +A++L++M
Sbjct: 61  KYSFTNSQGYGD-YKFIGLKNYIALFQDNRVGHAYLFTFFIAILITVLINV-IALFLSVM 118

Query: 115 LAHRIPGVVAFRLVFFLPYVLADVAAGLIWRFVYDG---DYGLFAAISNFFGFANPYVLA 171
           L  +I     FR +FF+PY L+ +  G ++++++     + G    I     + +  +L 
Sbjct: 119 LNSKIAFKNGFRAIFFIPYTLSVLVIGYVFKYIFMNPLPELGKALGIK----WLSTSLLT 174

Query: 172 DKDVAIYAVLGVIVWKYFGFHMMLFIAGLQSVDKNVLEAAEIDGASGWQKFRYVTLPMLG 231
           ++ ++   ++ + VW+   + +++++AGLQ++D  + EAA IDG + WQKF  +T P++G
Sbjct: 175 NEQLSWIPIVFLAVWQGIAYSVLIYLAGLQTIDDEIYEAAAIDGVNPWQKFWKITFPLIG 234

Query: 232 STVRLSVFFAVIGSLQLFDMIMPLTGGGPSNSTQTMVTFLYTYGVMRMQVGLGSAVGVVL 291
               +++  ++  +L  FD ++ LT GGP++ST+T+   ++  G+   +    +A  V+ 
Sbjct: 235 PFFTINLVLSMKNALGTFDQVVALTEGGPNSSTETVTYLIWKGGLTGGEYAYQTANAVLF 294

Query: 292 FVICVTLAFGYKRI 305
           F++   +AF   RI
Sbjct: 295 FIVLAIIAFVQLRI 308