Pairwise Alignments

Query, 282 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  131 bits (329), Expect = 2e-35
 Identities = 64/229 (27%), Positives = 126/229 (55%), Gaps = 2/229 (0%)

Query: 54  IPAEWQWANYGDILFGKRYWLQIFNSLVIALLTVFLTLTVSAMAAFTFAHVKFFGSSFLL 113
           +P+   + N+  +LF   +     NSL ++L T F T  ++A A + F+   F G   ++
Sbjct: 55  LPSAVTFENFATVLFETEFLAYFRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIII 114

Query: 114 NYFLLGLMFPAATAILPLFIRIRDLGLLDTYWGVVLPQVAFGLGMSILLFRNYFRNLPDE 173
              L+  MFP    I P++  + DLGLL++   +++   AF +  +  L +++F  +P +
Sbjct: 115 AVMLITQMFPLLMIIAPIYKIVADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKD 174

Query: 174 LFQAAFVDGCGYLRFFWHISVPLSRP-IVATVGIVSFVGSWNSYILPLIMLNSESKYPWP 232
           L +AA +DGC   +    +  PL+ P + AT+G V F  +W+  +  L++++      +P
Sbjct: 175 LEEAAMMDGCSRFQALRTVVFPLTLPGLGATLGFV-FTAAWSELLFALMLISKNDAMTFP 233

Query: 233 LGIMVYRGEFGTEWQLVLAFITLTILPTVIVFFLAQKHIIAGLTAGAVK 281
           +G++ +  +F  +W  ++A   L ++P+ + F   Q++++ GLT+GAVK
Sbjct: 234 VGLLTFVSKFSVDWGQMMAAGVLALVPSCLFFIFIQRYLVQGLTSGAVK 282