Pairwise Alignments

Query, 312 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 303 a.a., AraC family transcriptional regulator from Pseudomonas aeruginosa PA14

 Score =  117 bits (294), Expect = 3e-31
 Identities = 96/308 (31%), Positives = 141/308 (45%), Gaps = 18/308 (5%)

Query: 3   DALTEMLRGLRLDGVEYGRCRLATPWATAFPEQ--DAARFHFIGVGQAKLQKPSGEWLTL 60
           D L  +++   L G    RC+L   WA   P+     A FH +  G    +   G  L L
Sbjct: 2   DPLDRLIQLANLQGRLDQRCQLQGSWALEHPQAVPGEATFHIVMAGTCYCEFLDGARLDL 61

Query: 61  TCGDAVLLPRGHAHVLGSGESVTPSP--FDHFGKKEVCQGVFDLQCASAGGDTVAFTASM 118
             GD +LLPRG  H+L S     P     +H G   +       Q    G        S 
Sbjct: 62  HPGDLILLPRGTPHLLRSDSPAQPCEPTVEHRGSIPL------YQLNGPGEALDMLCGSY 115

Query: 119 RFNMDNLHPLLQLMPDVMLTSDLAKSDPAIPHLLEAMTREVELNRVGAGGILARLADVLT 178
           R++      L   +P+ +L      +   +  L+  M  E E  R GA  I+  LA  L 
Sbjct: 116 RYHAGA--SLFGALPERLLVHMDESTQQPLRALIGLMREEAESTRSGARSIIDALATALF 173

Query: 179 ATLIRTWVEHG-CGDSSGWLAAVRNPELGRVLAAIHLNPEKDWSVEELASLMGASRSSFA 237
           A  +R +++    GD  G    + +  LGR L A+   PE  W++E+LA     SR+SF 
Sbjct: 174 ALALRAYLDRQPLGD--GLFGLLGDARLGRALRAMLERPEHAWTLEQLAQQAAMSRASFV 231

Query: 238 ERFTRVVGESPARYVVRVRMHQARLWLREGMR--VTVAAEKLGYDSEASFSRAFKRVLGA 295
             F+ + G SP   + R+RM +AR  LR+  +  + +AAE  GY SEA+FSR F++  G 
Sbjct: 232 RAFSALGGTSPWILLTRIRMEKARGLLRQTQKSLLDIAAE-TGYQSEAAFSRNFRQAFGE 290

Query: 296 PPSQFRRK 303
            P +FRR+
Sbjct: 291 SPGRFRRQ 298