Pairwise Alignments

Query, 348 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (460), Expect = 2e-50
 Identities = 111/305 (36%), Positives = 174/305 (57%), Gaps = 13/305 (4%)

Query: 16  LAALFIILAAITIISPGFLDVSLQNGRLYGSLIDILVRAAPVALLTIGMTLVIATKGIDL 75
           L AL  ++  ++ ++P F  V         +L++IL + +  A++ +GMTLVI T GIDL
Sbjct: 35  LIALLFLVVVVSFLNPNFFTVD--------NLLNILRQTSVNAIIAVGMTLVILTAGIDL 86

Query: 76  SIGAVIAICGAVAATLISNGHSIPAVLAVSLAVGIACGLWNGVLVALLDIQPIIATLILM 135
           S+G+V+A+CGA AATL++    +   +  +L  G A G  +G+++A   +Q  IATL+ M
Sbjct: 87  SVGSVLALCGAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTM 146

Query: 136 VAGRGIAQLITEG--VILTFND--DGFAAIGSGSFAGVPLPVIIWVAAALVIGVLVRKSA 191
              RG+  + T+G  +   F D  D FA  G+G   G+P+PV + V        L+  + 
Sbjct: 147 TLLRGVTMVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTR 206

Query: 192 LGFLIEATGINRRAAALAGVRARFLLFFVYAVSGLCAAIAGMIVTADIRGADANNAGLWL 251
            G  + A G N  A  L+G+    +   VYA+ GL AA+AG+IVT+ +  A    AG+  
Sbjct: 207 FGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQP-TAGMGY 265

Query: 252 ELDAILAVVIGGTSLNGGRFSITASLIGALIIQTINTGILVSGFPPEFNLIIKAGIIMVV 311
           ELDAI AVV+GGTSL GG+  I  +LIGALII  +N  + +      + +I KA +I++ 
Sbjct: 266 ELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLA 325

Query: 312 LTLQS 316
           + + +
Sbjct: 326 VLVDN 330