Pairwise Alignments

Query, 348 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (370), Expect = 5e-40
 Identities = 117/322 (36%), Positives = 162/322 (50%), Gaps = 34/322 (10%)

Query: 17  AALFIILAAITIISPGFLDVSLQNGRLYGSLIDILVRAAPVALLTIGMTLVIATKGIDLS 76
           A LFI+LA I I  P FL  SL+N      L +IL +++   ++ +G+  +I T+G DLS
Sbjct: 21  AVLFILLAIIVIQEPSFL--SLRN------LSNILTQSSVRVIIALGVAGLIVTQGTDLS 72

Query: 77  IGAVIAICGAVAATLISNGHSIPAV---------LAVSLAV---GIACGLWNGVLVALLD 124
            G  + +   ++ATL+ +  ++  V         LAV ++V   G   GL NGV+VA L 
Sbjct: 73  AGRQVGLAAVISATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLK 132

Query: 125 IQPIIATLILMVAGRGIAQLITEGV----ILTFND------DGFAAIGSGSFAGVPLPVI 174
           + P IATL  M+   GI  L  + V    I  F++       GF  IG   F+ +    I
Sbjct: 133 VTPFIATLGTMIIVYGINSLYYDSVGASPIAGFDERFTTFTQGFIRIGDFRFSYITFYAI 192

Query: 175 IWVAAALVIGVLVRKSALGFLIEATGINRRAAALAGVRARFLLFFVYAVSGLCAAIAGMI 234
           I   A + + VL  K+  G  I A G N  AA ++GV     L  VYA+SG+  A  GM+
Sbjct: 193 I---AIIFMWVLWNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGML 249

Query: 235 VTADIRGADANNAGLWLELDAILAVVIGGTSLNGGRFSITASLIGALIIQTINTGILVSG 294
               I G+  NN G   ELDAI A V+GG S  GG  SI   + G LI   IN G+   G
Sbjct: 250 EAGRI-GSATNNLGFLYELDAIAACVVGGVSFAGGVGSIAGVVTGVLIFTVINYGMTYIG 308

Query: 295 FPPEFNLIIKAGIIMVVLTLQS 316
             P +  IIK  II+  + L S
Sbjct: 309 VSPYWQYIIKGSIIIFAVALDS 330