Pairwise Alignments

Query, 348 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 325 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  150 bits (380), Expect = 3e-41
 Identities = 94/300 (31%), Positives = 157/300 (52%), Gaps = 7/300 (2%)

Query: 20  FIILAAITIISPGFLDVSLQNGRLYGSLIDILVRAAPVALLTIGMTLVIATKGIDLSIGA 79
           F I   + I++  + D  L    L   +  +   A+   ++ IGM  V+ T+GIDLS+G+
Sbjct: 28  FGIFLVLVIVASFWSDAFLTERNLMNVVRQV---ASGAGIMAIGMLFVVLTRGIDLSVGS 84

Query: 80  VIAICGAVAATLIS-NGHSIPAVLAVSLAVGIACGLWNGVLVALLDIQPIIATLILMVAG 138
           + A+   + A L++  G+ +P  + + +  G ACG+  G  VA + +   + +L +M   
Sbjct: 85  IAAVGSVLCAHLVAAQGYGVPMAILLVILTGAACGVVTGFFVAYMRLPSFVISLAMMAIA 144

Query: 139 RGIAQLITEGVILTFNDDGFAAI--GSGSFAGVPLPVIIWVAAALVIGVLVRKSALGFLI 196
           RGI+ +I+ G  +T    G + +  GSG   G+P P I+ +    + GV++  ++ G ++
Sbjct: 145 RGISLIISAGRPITMGSPGASLVDFGSGFLFGIPQPAILMLVIYAIGGVVLLYTSFGRIV 204

Query: 197 EATGINRRAAALAGVRARFLLFFVYAVSGLCAAIAGMIVTADIRGADANNAGLWLELDAI 256
            A G N  A  L+GV     +  VY +SG  AA+AG IV A   G      G+  ELD I
Sbjct: 205 TAIGSNEEAVRLSGVPVERYVLSVYVISGALAAVAG-IVAAGRTGIGTPQVGVGAELDVI 263

Query: 257 LAVVIGGTSLNGGRFSITASLIGALIIQTINTGILVSGFPPEFNLIIKAGIIMVVLTLQS 316
            AVVIGG SL GGR  +  +L+GALI+  I   + ++G P     +    +++  +T +S
Sbjct: 264 AAVVIGGASLMGGRGGMFNTLLGALILGIITNIMNLAGVPGYHQNVYLLAMLIQFVTARS 323