Pairwise Alignments

Query, 348 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

Subject, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  140 bits (354), Expect = 4e-38
 Identities = 91/316 (28%), Positives = 163/316 (51%), Gaps = 20/316 (6%)

Query: 9   LKRLAPQLAALFIILAAITIISPGFLDVSLQNGRLYGSLIDILVRAAPVALLTIGMTLVI 68
           L+ +AP  AAL ++L    +++P F  +SL N      L ++  R+A +A++ +G T VI
Sbjct: 22  LRAVAP-FAALALLLIVGAMVNPNF--ISLNN------LANVATRSAFIAIIAVGATFVI 72

Query: 69  ATKGIDLSIGAVIAICGAVAATLISNGHSIPAVLAVSLAV------GIACGLWNGVLVAL 122
           +   +DLS+G+++A   ++    +++G      L ++ AV      G  CGL NG++  +
Sbjct: 73  SAGDLDLSVGSMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTV 132

Query: 123 LDIQPIIATLILMVAGRGIAQLITEGVILTFNDDGFAAIGS----GSFAGVPLPVIIWVA 178
             I+P IATL  M   RG+   +++G  +T  +     +      GS  G+P+P+ I +A
Sbjct: 133 GRIEPFIATLGTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFGSILGMPVPIAIILA 192

Query: 179 AALVIGVLVRKSALGFLIEATGINRRAAALAGVRARFLLFFVYAVSGLCAAIAGMIVTAD 238
              V   ++ ++  G  + A G N   A  +G+    +    + + GLC A+A ++    
Sbjct: 193 VTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPR 252

Query: 239 IRGADANNAGLWLELDAILAVVIGGTSLNGGRFSITASLIGALIIQTINTGILVSGFPPE 298
           +    A    LW EL AI AVV+GGT+L GG   +  ++ GA I++ +   +L+S F  E
Sbjct: 253 LGSTSATTGILW-ELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISE 311

Query: 299 FNLIIKAGIIMVVLTL 314
           + +    G I+++  L
Sbjct: 312 YLIGAMQGAIIIIAML 327