Pairwise Alignments

Query, 261 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (476), Expect = 3e-52
 Identities = 98/235 (41%), Positives = 148/235 (62%), Gaps = 1/235 (0%)

Query: 15  YRTGARTVTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIPADEGTVRFENRDWL 74
           +R     + A++D+SF+L +G++LGL G SG GKST    +++L+ A +G +RF  +D  
Sbjct: 292 FRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLL-ASQGAIRFAGQDLQ 350

Query: 75  ALGGSELRAARQQMQMVFQDTHGAFNPRATVEDAISEPLRIHRIVKRRDRAAEISRLLDR 134
           AL   E+   R +MQ+VFQD + A NPR +V   I E LR+H  +   +    I  ++  
Sbjct: 351 ALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQE 410

Query: 135 VGLPAAYAGRSVFELSGGQRQRVAIARAIALKPSLLILDEAVSALDVSVRRQILELLVEI 194
           VGL      R   E SGGQRQR+AIARA+ LKP  ++LDE  S+LD +V+ Q+L+LL ++
Sbjct: 411 VGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDL 470

Query: 195 QREMAISCIFVSHDLAVIRAVCHRVAIMETGRIVEIGETGAIISAPQSSTARSLI 249
           Q++  ++ +F+SHDLAVIRA+CH   +M+ G IVE GET ++   P     + L+
Sbjct: 471 QQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525



 Score =  160 bits (404), Expect = 7e-44
 Identities = 94/262 (35%), Positives = 147/262 (56%), Gaps = 8/262 (3%)

Query: 1   MNEALLSVDGLSKTYRTGARTVTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIP 60
           MN+ +L +D LS  +    +       +S ++ RGETL L G SG GKS  A  ++RL+P
Sbjct: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60

Query: 61  ADE-----GTVRFENRDWLALGGSELRAARQ-QMQMVFQDTHGAFNPRATVEDAISEPLR 114
                   G++ F + D L      LR  R  ++ M+FQ+   + NP   +   + E L 
Sbjct: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120

Query: 115 IHRIVKRRDRAAEISRLLDRVGL--PAAYAGRSVFELSGGQRQRVAIARAIALKPSLLIL 172
           IHR ++      +    L +VG+  P         ELSGG+RQRV IA A+  +P LLI 
Sbjct: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180

Query: 173 DEAVSALDVSVRRQILELLVEIQREMAISCIFVSHDLAVIRAVCHRVAIMETGRIVEIGE 232
           DE  +ALDVSV+ QIL+LL  +Q+E+ ++ +F++HDL+++R +  RVA+M++G++VE   
Sbjct: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240

Query: 233 TGAIISAPQSSTARSLIDAAPR 254
              + +AP     + LI+A PR
Sbjct: 241 CHTLFAAPAHPYTQQLINADPR 262