Pairwise Alignments

Query, 261 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 8e-54
 Identities = 104/234 (44%), Positives = 149/234 (63%), Gaps = 2/234 (0%)

Query: 22  VTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIPADEGTVRFENRDWLALGGS-E 80
           V A +++SF++  GET GL G SG GKST+AR++  L   + G V FE  D  AL    E
Sbjct: 326 VQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLTALKSEHE 385

Query: 81  LRAARQQMQMVFQDTHGAFNPRATVEDAISEPLRIHRIVKRRDRAAEI-SRLLDRVGLPA 139
            R  R+QMQMVFQ+ + + NPR  + D I+EP+R H++ +      +I + LL+ VGL  
Sbjct: 386 RRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGK 445

Query: 140 AYAGRSVFELSGGQRQRVAIARAIALKPSLLILDEAVSALDVSVRRQILELLVEIQREMA 199
               +   E SGGQRQR++IARA+A +P LLI DE  SALDVSV+ QIL LL ++Q E+ 
Sbjct: 446 MAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELN 505

Query: 200 ISCIFVSHDLAVIRAVCHRVAIMETGRIVEIGETGAIISAPQSSTARSLIDAAP 253
           ++ +F+SHDL VIR +C RV +M+ G ++E+  T  + + PQ   ++ LI   P
Sbjct: 506 LTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559



 Score =  139 bits (350), Expect = 1e-37
 Identities = 86/258 (33%), Positives = 134/258 (51%), Gaps = 7/258 (2%)

Query: 4   ALLSVDGLSKTYRTGARTVTALSDISFSLKRGETLGLAGPSGCGKSTLARILMRLIPADE 63
           +LL V  L   Y +      A+  ++  ++RGE +G+ G SG GKST+   ++ L+    
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 64  ----GTVRFENRDWLALGGSELRAAR-QQMQMVFQDTHGAFNPRATVEDAISEPLRIHRI 118
               G V         L    +R  R  ++  +FQD   + NP  TVE  ++E +  +  
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 119 VKRRDRAAEISRLLDRVGLPAAYAGRSVF--ELSGGQRQRVAIARAIALKPSLLILDEAV 176
           V   +       L+ +VG+P        +  + SGG RQRV IA A+A +P L+I DE  
Sbjct: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181

Query: 177 SALDVSVRRQILELLVEIQREMAISCIFVSHDLAVIRAVCHRVAIMETGRIVEIGETGAI 236
           +ALDVS++ QIL L+ E+ ++  + C+ V+HD+ V+  V  RVA+M  G +VE G T  +
Sbjct: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241

Query: 237 ISAPQSSTARSLIDAAPR 254
           +  P+    RSLI A PR
Sbjct: 242 LGTPEHPYTRSLISAVPR 259