Pairwise Alignments

Query, 267 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (442), Expect = 3e-48
 Identities = 95/254 (37%), Positives = 151/254 (59%), Gaps = 7/254 (2%)

Query: 5   ALCRIDDLSVRYAAADA--PALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAGLLPARA 62
           +L  + +L + Y +      A++  +L I++G+ + ++GESG+GKST+G A+  LL    
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 63  QVSGD---ISWSRDSGLFTG--RPMPGRDIGTIFQDTGATLNPVLTIGEQVAEGAVRHLG 117
            ++G    ++  + SGL     R + G  IG IFQD   +LNP+ T+  Q+ E    ++ 
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 118 LSWRQGRDLARDLLERVRLPHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILIADEAT 177
           +S  +    A  L+++V +P P + L  YPHQ SGG RQRV IA A+A  P ++IADE T
Sbjct: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181

Query: 178 SALDTVTQAAIAALLDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHGPARRV 237
           +ALD   Q  I  L+  L ++     + +THD+G+ S++ D +AV+  G+LVE GP  +V
Sbjct: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241

Query: 238 LSAPTHPYTRTLLA 251
           L  P HPYTR+L++
Sbjct: 242 LGTPEHPYTRSLIS 255



 Score =  142 bits (359), Expect = 1e-38
 Identities = 90/258 (34%), Positives = 143/258 (55%), Gaps = 15/258 (5%)

Query: 6   LCRIDDLSVRYAAADA---------PALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAG 56
           L +++++++R+   D+          A    S  + +G+   ++GESGSGKST+ + IAG
Sbjct: 302 LLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAG 361

Query: 57  LL-PARAQVSGD-ISWSRDSGLFTGRPMPGRDIGTIFQDTGATLNPVLTIGEQVAEGAVR 114
           L  P   +V+ + I  +        RP+  R +  +FQ+   ++NP + I + +AE    
Sbjct: 362 LYQPNAGRVTFEGIDLTALKSEHERRPLR-RQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420

Query: 115 H-LGLSWRQGRDLARDLLERVRLPHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILIA 173
           H L  S  + R +  DLLE V L   + L   YPH+ SGGQRQR++IA A+A RP +LI 
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQRISIARALATRPRLLIC 478

Query: 174 DEATSALDTVTQAAIAALLDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHGP 233
           DE TSALD   QA I  LL  L  E   T++FI+HD+ +   + D + V+  G L+E  P
Sbjct: 479 DEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAP 538

Query: 234 ARRVLSAPTHPYTRTLLA 251
             ++ + P H Y++ L++
Sbjct: 539 TEQLFTDPQHEYSKKLIS 556