Pairwise Alignments

Query, 267 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  179 bits (454), Expect = 1e-49
 Identities = 115/270 (42%), Positives = 152/270 (56%), Gaps = 10/270 (3%)

Query: 1   MSGNALCRIDDLSVRYAAADAP--ALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAGLL 58
           M+G  L  + DL+V + +      A    S  +  G+ L I+GESGSGKS    AI GL+
Sbjct: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60

Query: 59  --PARAQVSGDISW-SRD-SGLFTG--RPMPGRDIGTIFQDTGATLNPVLTIGEQVAEGA 112
             P     +G +++  RD S L  G  R + GR I  IFQD  + LNPV TIG Q+ E  
Sbjct: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120

Query: 113 VRHLGLSWRQGRDLARDLLERVRLPHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILI 172
             H   S  + R  A ++L RV +P P   +  YPHQ SGGQRQR+ I  AIA RP ILI
Sbjct: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180

Query: 173 ADEATSALDTVTQAAIAALLDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHG 232
           ADE T+ALD   QA I  LL  L  E+   ++ ITHD+ +A+++AD + V+ +G +VE G
Sbjct: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240

Query: 233 PARRVLSAPTHPYTRTLL--ADYLDLSTPP 260
            AR V   P H YTRTL+    + D   PP
Sbjct: 241 EARAVFENPAHSYTRTLINALPHADDRAPP 270



 Score =  136 bits (342), Expect = 1e-36
 Identities = 88/239 (36%), Positives = 124/239 (51%), Gaps = 23/239 (9%)

Query: 23  ALRKASLTIRQGQRLAIIGESGSGKSTLGKAIAGLLPARAQVSGDISWSRDSGLFTGRPM 82
           A++  S  +  G+ + I+GESGSGKST+ + + GL  A          S    LF GR +
Sbjct: 305 AVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEA----------SGGEALFHGRDV 354

Query: 83  PGRD----------IGTIFQDTGATLNPVLTIGEQVAEGAVRHLG-LSWRQGRDLARDLL 131
              D          +  +FQD  +++NP +T+ + V+E    H   L   + RD   +LL
Sbjct: 355 LKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELL 414

Query: 132 ERVRLPHPSHLLSAYPHQLSGGQRQRVAIAAAIAARPAILIADEATSALDTVTQAAIAAL 191
             V L +P H    YPHQ SGGQRQR+AIA A+A  P +++ DEA SALD   Q  +  L
Sbjct: 415 GLVGL-NPEHA-KRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDL 472

Query: 192 LDGLVREEETTLVFITHDIGLASSLADDIAVLSAGELVEHGPARRVLSAPTHPYTRTLL 250
           L  L        +FITHD+ +    AD I V+ +GE+VEH     +   P H YTR L+
Sbjct: 473 LAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLI 531