Pairwise Alignments

Query, 404 a.a., RND multidrug efflux membrane permease from Agrobacterium fabrum C58

Subject, 397 a.a., Multidrug efflux pump subunit AcrA from Enterobacter sp. TBS_079

 Score =  327 bits (839), Expect = 3e-94
 Identities = 177/380 (46%), Positives = 248/380 (65%), Gaps = 2/380 (0%)

Query: 8   IAAVLLTGIVLVGCSDEQASAPAAPPPGAVKVVAVKPEELPITNELPGRIAPTRLAEVRP 67
           +  +L   + L GC D+QA   A   P  V VV +K E L IT ELPGR +  R+AEVRP
Sbjct: 12  VVLMLSGSLALTGCDDKQAQQGAQQVP-EVGVVTLKSEPLQITTELPGRTSAYRIAEVRP 70

Query: 68  RVSGIIVERVFEQGSLVKEGDVLYRIDRAPFQVRVDSAEGTLRRAQAAQLQARQTADRQQ 127
           +VSGII++R F +G  VK G+ LY+ID A +Q   +SA+G L +A+AA   ++ T +R +
Sbjct: 71  QVSGIILKRNFTEGGEVKAGESLYQIDPATYQASYESAKGDLAKAEAAAKISQLTLNRYK 130

Query: 128 QLRRSNVGSQQEFDNAIALLAQADAEVAVAEAGVAEARLNLQYADVKAPISGVIGRARIT 187
           +L  +   SQQ++D A++   Q +A V  A+A V  AR+NL Y  V +PISG IG++ +T
Sbjct: 131 KLLGTKYISQQDYDTALSDAQQTNAAVIAAKAAVETARINLAYTKVTSPISGRIGKSSVT 190

Query: 188 EGALVSATGSENLATIQQLDPIYADFTQPAADLIRLRKALQDGQLMTGQNEAEVNLLFDD 247
           EGALV    +  LAT+QQLDPIY D TQ + D +RL++ L +G L     +A+V L+ +D
Sbjct: 191 EGALVQNGQTNALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVELVTND 250

Query: 248 GSRYPVSGRLLFSEAAVDETTGQVTLRGEFPNPNGDLLPGMYVRVQIQQGIQKAAFAVPQ 307
           G ++P +G L FS+  VD+TTG +TLR  FPNP+  LLPGM+VR ++++G    A  VPQ
Sbjct: 251 GIKFPQAGTLEFSDVTVDQTTGSITLRAIFPNPDKTLLPGMFVRARLEEGTNPTALLVPQ 310

Query: 308 QAVQRDAGGQASVLVVNAEDTVEQRRVSVGRSIGDRWVISEGLDDGDRVVAEGFQKTAPG 367
           Q V R   G AS LVV A+D VE R ++  ++IGD+W+++EGL DGDRV+  G QK  PG
Sbjct: 311 QGVTRTPRGDASALVVGADDKVETRNITATQAIGDKWLVTEGLKDGDRVIITGLQKVRPG 370

Query: 368 AKVK-PEPWSQEPDVAAAAG 386
           A+VK  E  S +   A+AAG
Sbjct: 371 AQVKAQEVKSDDKQQASAAG 390