Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (313), Expect = 3e-33
 Identities = 108/364 (29%), Positives = 172/364 (47%), Gaps = 32/364 (8%)

Query: 18  PCLVVDLDVVRDNFNAFRHSLPN--SAIYYAVKANPAPEILKLLASLGSNFDCASVAEIQ 75
           P  V     +  +++AF  S+ +    I YAVKAN    +L  LA LGS FD  SV E++
Sbjct: 29  PLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGELE 88

Query: 76  MALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAA----PGARVF 131
             L AG    ++ F    K E ++ RA  L I  F V+S  E++++ + A      A + 
Sbjct: 89  RVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPIS 148

Query: 132 CRVLTDGEGAEWPL------SRKFGCVPQMAVDVLVYAHQM-GLESYGVSFHVGSQMMNL 184
            R+  D +    P         KFG     A  V   AH +  L+ +G+  H+GSQ+  L
Sbjct: 149 LRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLTAL 208

Query: 185 ----DAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDV-PAAEEYGQAIDTAL 239
               DA D  LA    +  SL  +GIH++ +++GGG    Y  ++ P   EY +A+   L
Sbjct: 209 APFIDATDRLLA----LIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRL 264

Query: 240 RKHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMD 299
            +H   ++   I EPGR +  NAGV+  +V  + K +++ N  +  +D      +   + 
Sbjct: 265 ERHRDLEL---IFEPGRAIAANAGVLVTKVEFL-KHTEHKN--FAIIDAAMNDLIRPALY 318

Query: 300 EAIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTT 359
           +A +  I     Q E Q   L GP C+++D L +       + L  GD + +  +GAY  
Sbjct: 319 QAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDR----DLVLQEGDLLAVRSSGAYGF 374

Query: 360 TYSA 363
           T S+
Sbjct: 375 TMSS 378