Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  105 bits (261), Expect = 3e-27
 Identities = 100/337 (29%), Positives = 150/337 (44%), Gaps = 31/337 (9%)

Query: 43  IYYAVKANPAPEILKLLASLGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARA 102
           I YAVKAN    +L +LA LGS FD  S  E+   L+AG    ++ F    K   ++  A
Sbjct: 55  ICYAVKANSNLAVLNVLARLGSGFDIVSGGELSRVLEAGGDPAKVVFSGVGKTVAEMELA 114

Query: 103 HALGIDLFAVDSHEEVEKV----ARAAPGARVFCRVLTDGEGAEWPL------SRKFGCV 152
              GI  F ++S  E+E +     R    A V  RV  D +    P         KFG  
Sbjct: 115 LNTGIMCFNLESGAELELLNEVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIP 174

Query: 153 PQMAVDVLVYAHQM-GLESYGVSFHVGSQMMN----LDAWDAALADAKRVFASLAKQGIH 207
            + A  +   A  +  L   GV  H+GSQ+      LDA D  LA   R    LA+QGI 
Sbjct: 175 MEEAEALFARAAALPNLAVKGVDCHIGSQLTELKPFLDAMDRMLALIDR----LAEQGIV 230

Query: 208 LQMVNMGGGFPTKYLRDVPA-AEEYGQAIDTALRKHFGNQIPKTIIEPGRGMVGNAGVIK 266
           ++  ++GGG    Y  + P   + Y  AI   L K  G  + K I EPGR +  NAG+  
Sbjct: 231 IEHFDVGGGLGVTYNGETPPHPDVYAAAI---LEKLNGRPL-KLIFEPGRAIAANAGIFV 286

Query: 267 AEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAIRYPIRTERDQDEMQPCVLAGPTCD 326
            +V+      DN + R+V +D      +  ++  A +  I   +  +    C + GP C+
Sbjct: 287 TQVLYT---KDNGDKRFVIVDGAMNDLIRPSLYGAWQNIIPAVKTNEPTTRCDVVGPVCE 343

Query: 327 SADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYSA 363
           + D L +       ++   GD +++   GAY  T ++
Sbjct: 344 TGDFLGKDR----ELAAGSGDLLVVRSAGAYGFTMAS 376