Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 391 a.a., ornithine decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  380 bits (975), Expect = e-110
 Identities = 190/378 (50%), Positives = 259/378 (68%), Gaps = 5/378 (1%)

Query: 2   TTARILDFIKTRRPEGPCLVVDLDVVRDNFNAFRHSLPNSAIYYAVKANPAPEILKLLAS 61
           T ARI +F K +    P +V+D +++   ++    + P + +YYAVKANPA EIL LL  
Sbjct: 17  TFARIQEFAKDKAT--PFVVIDTNIIAKQYDDMVTNFPFANVYYAVKANPAKEILTLLKD 74

Query: 62  LGSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKV 121
            GSNFD AS+ E+ M +  G T+DR+SFGNTIKK +DV   +  G+ LFA DS  ++  +
Sbjct: 75  KGSNFDIASIYELDMVMAVGVTADRVSFGNTIKKRKDVRAFYERGVRLFASDSEADLRMI 134

Query: 122 ARAAPGARVFCRVLTDG-EGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQ 180
           A  APG++V+ R+LT+G + A+WPLSRKFGC  +MA ++L  A ++GL+ YG+SFHVGSQ
Sbjct: 135 AEEAPGSKVYVRILTEGSQTADWPLSRKFGCQNEMAYELLALAKELGLDPYGISFHVGSQ 194

Query: 181 MMNLDAWDAALADAKRVFASLAKQ-GIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTAL 239
             ++ AWDAA+   K +F  L +  GI L+M+NMGGGFP  Y+        Y Q I   L
Sbjct: 195 QRDIGAWDAAIGKVKVLFDRLREDHGIVLKMINMGGGFPANYIDKTNQLGVYAQQIKHFL 254

Query: 240 RKHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMD 299
           ++ FG+++P+ I+EPGR ++ NAGV+ +EVVL+S+KS     RWV+ D+GKF GL ETMD
Sbjct: 255 KEDFGDELPEIILEPGRSLISNAGVLISEVVLISRKSHTALERWVYTDVGKFSGLIETMD 314

Query: 300 EAIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTT 359
           EAI+YPI TE+ + E+  CV+AGPTCDSAD++YE   Y LP  L IGD +     GAYTT
Sbjct: 315 EAIKYPIFTEK-KGELDKCVIAGPTCDSADIMYEHYAYGLPADLAIGDRLYWLTAGAYTT 373

Query: 360 TYSAVAFNGFEPLKAYVI 377
           TYSAV FNGF PLK Y +
Sbjct: 374 TYSAVCFNGFPPLKDYYL 391