Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 425 a.a., Diaminopimelate decarboxylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (306), Expect = 2e-32
 Identities = 105/366 (28%), Positives = 165/366 (45%), Gaps = 23/366 (6%)

Query: 18  PCLVVDLDVVRDNFNAFRHSLPNSAIY--YAVKANPAPEILKLLASLGSNFDCASVAEIQ 75
           P  V     +  +F  F  +     I   +A K N    +L LLA LG+  D  S  E++
Sbjct: 28  PFYVYSAATLERHFRVFSDAFAGQPITLCFATKTNGNKAVLALLAGLGAGADVVSQGEME 87

Query: 76  MALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAAPG----ARVF 131
            AL AG  + RI F    K + ++A A   GI    V+S  E+E ++  A      A V 
Sbjct: 88  HALAAGVPAGRIVFSGVAKTKAEMAAALEAGIFQINVESEPELEALSEVAQALGKTAPVA 147

Query: 132 CRV------LTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQM-GLESYGVSFHVGSQMMNL 184
            R+       T  + A      KFG    +A  +   A  + G+   GV+ H+GSQ+++L
Sbjct: 148 LRINPDVAAATHDKIATGRKENKFGIDWTVAPAIFAKAAGLPGIAVKGVAVHIGSQILDL 207

Query: 185 DAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALRKHFG 244
           D +  A    + +  +L   GI L+ V++GGG    Y RD PA+    +    A R+ FG
Sbjct: 208 DPFRRAFERLRELVLALRADGIALERVDLGGGLGIPYHRDDPASPPPAEYAALA-RRIFG 266

Query: 245 NQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAIR- 303
           +     + EPGR + GNAG++ + VV    +   +   ++ LD G    +   M +A   
Sbjct: 267 DLGVHLVAEPGRLIAGNAGMLVSRVVY---RKQGETRTFLILDAGFNDLIRPAMYDAFHD 323

Query: 304 -YPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYS 362
             P+    +   + P  + GP C+S D+   +   PLP  +  GD V     GAY  + S
Sbjct: 324 ILPVTAAAENAVLTPVDVVGPICESGDIFARQR--PLP-PIAAGDLVAFATAGAYGASMS 380

Query: 363 AVAFNG 368
           +  +NG
Sbjct: 381 S-TYNG 385