Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 398 a.a., Ornithine decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  369 bits (946), Expect = e-106
 Identities = 195/375 (52%), Positives = 251/375 (66%), Gaps = 3/375 (0%)

Query: 4   ARILDFIKTRRPEGPCLVVDLDVVRDNFNAFRHSL-PNSAIYYAVKANPAPEILKLLASL 62
           +R+  FI  R  + P LV+D D V   ++A  H L   + I+YA+KANPAPEIL+ LA+ 
Sbjct: 26  SRLRGFIDGRIFDRPTLVLDCDAVVAKYHALAHGLGQGTLIHYAMKANPAPEILRALAAE 85

Query: 63  GSNFDCASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVA 122
           G  FD AS  EI++AL AGAT+ RISFGNTIK+  D+A AHA GIDLFA D+  E++K+A
Sbjct: 86  GCGFDAASRGEIELALAAGATAARISFGNTIKRPSDIAFAHAHGIDLFAADAEAELDKIA 145

Query: 123 RAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQMGLESYGVSFHVGSQMM 182
             APGARVF RVL    GA+WPLSRKFGC P  A+ ++  A  +GL   G+SFHVGSQ  
Sbjct: 146 AHAPGARVFLRVLVGATGADWPLSRKFGCAPDTALRLMDRAAFLGLRPVGLSFHVGSQTR 205

Query: 183 NLDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALRKH 242
           +   W   L     ++ +   +G  L ++N+GGGFP  Y   +  AE Y   +   +R  
Sbjct: 206 DPGMWSDTLDQMAEIWHAGRARGHDLNLINIGGGFPAFYGDPILEAETYAGRVGALVRAR 265

Query: 243 FGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAI 302
           FG+     + EPGRG+V  AG+I AEV+LVS+KS++D  RWV+LDIGKF GLAETM+EAI
Sbjct: 266 FGD--ATVMAEPGRGLVAEAGMIVAEVLLVSRKSEDDLCRWVYLDIGKFSGLAETMEEAI 323

Query: 303 RYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYS 362
           RY   T  D  E  PC++AGP+CDSADVLYE+    LP++L  GD +LI+ TGAYTTTYS
Sbjct: 324 RYQFVTPHDGGETGPCIMAGPSCDSADVLYEQRPVHLPMALQSGDRILIKATGAYTTTYS 383

Query: 363 AVAFNGFEPLKAYVI 377
           +V FNGF PL   VI
Sbjct: 384 SVGFNGFPPLDLIVI 398