Pairwise Alignments

Query, 377 a.a., ornithine decarboxylase from Agrobacterium fabrum C58

Subject, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 11  KTRRPEGPCLVVDLDVVRDNFNAFRHSL---PNSAIYYAVKANPAPEILKLLASLGSNFD 67
           K R  + P    D  V+RD  +A    +   P+ +++YAVKAN  P++L ++   G   D
Sbjct: 9   KFRTLQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGAD 68

Query: 68  CASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAAPG 127
           C S  EI+ A+ AG  +++I F    K + ++      GI  F V+S  E+E +   A  
Sbjct: 69  CVSGGEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAA 128

Query: 128 ARVFCRV---LTDGEGAEWPLS-------RKFGCVPQMAVDVLVYAHQM-GLESYGVSFH 176
                 V   +    GA    +        KFG   Q    V+  A +M  ++  G+ FH
Sbjct: 129 QNKIANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFH 188

Query: 177 VGSQMMNLDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKY----LRDVPAAEEYG 232
           +GSQ++++  + A       +   L  + I ++ +N+GGG    Y     + VP  + Y 
Sbjct: 189 IGSQILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYF 248

Query: 233 QAIDTALRKHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFG 292
                 L+            E GR +VG  G + ++V+ V +       ++  LD G   
Sbjct: 249 ATYAGQLKL---RPYQTLHFELGRAVVGQCGSLISKVLYVKQ---GTKKKFAILDAGMTD 302

Query: 293 GLAETMDEAIRYPIRTERDQDEMQPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIE 352
            +   + +A  + +     ++ ++   + GP C+S+DV + K +    V    GD + + 
Sbjct: 303 LIRPALYQAY-HKMENITSEEPVEAYDVVGPICESSDV-FGKAIDLNKVKR--GDLIALR 358

Query: 353 GTGAY 357
             GAY
Sbjct: 359 SAGAY 363